Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015707_3                                                                                                                 top


Strain : Thermotoga thermarum DSM 5069 RefSeq :NC_015707 (chromosome circular)
CRISPR id : NC_015707_3
DR consensus (30 bp) : GTTTGGACACTACCTATGAGGAATGGAAACNumber of repetitions :19
Begin Position : 1165766 End Position : 1166980

1165766GTTTGGACACTACCTATGAGGAATGGAAACTTTGTATACACAAGTGATGAAGGGTCTGGATATTGT 1165831
1165832GTTTGGACACTACCTATGAGGAATGGAAACCATTCATGCTTTCTAGATATTACAAATCCCACTACA 1165897
1165898GTTTGGACACTACCTATGAGGAATGGAAACACTTGAACGCCTTGCGGGCAGACTAAGAGAATATCC 1165963
1165964GTTTGGACACTACCTATGAGGAATGGAAACGCTCGTTTGCTTCTTCAAGCAGTTTTGCGGTGATTGC 1166030
1166031GTTTGGACACTACCTATGAGGAATGGAAACGAGGCTTTTTCGGCTCAACTGGCAACGTCGGTTCAA 1166096
1166097GTTTGGACACTACCTATGAGGAATGGAAACAATGGGAGGAACTGTATACTACTGCGACACAGATTC 1166162
1166163GTTTGGACACTACCTATGAGGAATGGAAACTTGTGAATTCTTATAACATCACCTTCGATCCACTCTA 1166229
1166230GTTTGGACACTACCTATGAGGAATGGAAACTGGGTATGTGGGCGCAAGTTTTGAATCAAAAGACTTA 1166296
1166297GTTTGGACACTACCTATGAGGAATGGAAACATTTCCGTTTGCGTGTGTTCGCCTGTCACTGTTACGA 1166363
1166364GTTTGGACACTACCTATGAGGAATGGAAACACTACGTAACATCTACACGTGTGTTCACGTTCACCTC 1166430
1166431GTTTGGACACTACCTATGAGGAATGGAAACGCTTTTTGACTTATTGCACTGACGTTTGTGTTGATT 1166496
1166497GTTTGGACACTACCTATGAGGAATGGAAACCTTTCAACATAATTGGTTGTGATGTATCAGCACCAA 1166562
1166563GTTTGGACACTACCTATGAGGAATGGAAACCAGCGTTTATTCGATGAAAACTAAGAAGTATTCTATACG 1166631
1166632GTTTGGACACTACCTATGAGGAATGGAAACACGCTTGCCTCTCTGTGTCTGAGGCCAACTGCAATCAA 1166699
1166700GTTTGGACACTACCTATGAGGAATGGAAACTTTCCAAGTTTAGATTTAGCGAGTCTGAACAAATGT 1166765
1166766GTTTGGACACTACCTATGAGGAATGGAAACGTTGCTTTGCAGGGCAGACATATGTCTGCCCATTCCT 1166832
1166833GTTTGAACCCTACCTATGAGGAATGGAAACGCCTACAACAGCAACTTTCACTCCACTCACCTCCC 1166897
1166898GTTTGGACACTACCTATGAGGAATGGAAACCCTATCCAGACTCTGTAGTGCGT 1166950
1166951TTTTGAACCTTACCTATGAGGAATAGAAAC1166980
Left flanking sequence : Till position 1165766 (length bp)
AGCTATACGAATTTCCAAAAAGTTGACTTGGCAAAAGCAAAAGTGATATAATTTGACCAGAATCCAAAGA
TGCTGGTATAATCACATATAGAAAAAACGG
Right flanking sequence : From position 1166980 (length bp)
AAGCCTTAGGGGCTTGGGAGGCTGTTTCTGCGTTTTGAATTTACACTGTTGGGAAGACAGACAAGTCACT
GAAAGCAATGTGGTGAAGTTGTTAATCGAA
Print the CRISPR sequence : From position bp To position bp