Institut de Génétique et Microbiologie

CRISPR details


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Université Paris Sud

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NC_015931_4                                                                                                                 top


Strain : Pyrolobus fumarii 1A RefSeq :NC_015931 (chromosome circular)
CRISPR id : NC_015931_4
DR consensus (25 bp) : CTTTCAATTCATTCTTGGTTGTTTCNumber of repetitions :80
Begin Position : 461092 End Position : 466549

461092CTTTCAATTCATTCTTGGTTGTTTCGCAATACTACGTGGTGAAGAGGTGCCGCCAGAGTCAGGCATTGAC 461161
461162CTTTCAATTCATTCTTGGTTGTTTCGAGAGCATGACGTGTGTGTCACAACCGGCAAGAAGGGCGTGTGTAT 461232
461233CTTTCAATTCATTCTTGGTTGTTTCCAGCGCCTGCTCCTAGGCCGTGACCGTGACGAGGAGACGGTCTATGTCACC 461308
461309CTTTCAATTCATTCTTGGTTGTTTCGGGTGTGGTAGCCGAACGATAGCCTGGCTAGTGATAGTGTGTA 461376
461377CTTTCAATTCATTCTTGGTTGTTTCCCAAACTTGCCACCAATGCCTCAGCCAACACCAAAACCGTAAG 461444
461445CTTTCAATTCATTCTTGGTTGTTTCTCCCCGCGATTGTCGATACGCCGGGTGTCGTTACCGTTGG 461509
461510CTTTCAATTCATTCTTGGTTGTTTCCTGTGTCCGCGCCCGGGGACACCCCTCCCTCAGCATGTGCTC 461576
461577CTTTCAATTCATTCTTGGTTGTTTCCCCTTGTAGCGAGCCACGGCCAACACACCAACCCGATGCTAGTT 461645
461646CTTTCAATTCATTCTTGGTTGTTTCACCGCTCTACGCCACCCCCTACCTGAACGTCACGACCGG 461709
461710CTTTCAATTCATTCTTGGTTGTTTCACAAAACGCGCGATATATAGACGCGCGCGGCTATAATATAATATAACGCGA 461785
461786CTTTCAATTCATTCTTGGTTGTTTCCTCGATAGCTCTACGAATCGCCTCTGAGCGATTTATTCCACG 461852
461853CTTTCAATTCATTCTTGGTTGTTTCACGGATACGTCTCGCACAGACGTACCTCTATCGTCACTTTATCTTTT 461924
461925CTTTCAATTCATTCTTGGTTGTTTCGAAACCCTCTTGACGGGAATGTGGCAGGGCAAGTGGAA 461987
461988CTTTCAATTCATTCTTGGTTGTTTCCTACCAACGTGCTGGTGGCCGCAGCCAGCCTAGCCCCGGACATC 462056
462057CTTTCAATTCATTCTTGGTTGTTTCGGCGCTGCTGGAAGCCGTGGTGGAGTCTATACCGGTGCTGGAC 462124
462125CTTTCAATTCATTCTTGGTTGTTTCTACCCGACTGCCAGGGGAGTACACGTTTACGCCACTAGCGAGTCACCATGGGT 462202
462203CTTTCAATTCATTCTTGGTTGTTTCGCTGCTGCAGCCTTTATTGCACAGAACGGCTCGTAGCTTAC 462268
462269CTTTCAATTCATTCTTGGTTGTTTCCTCGAGAGCCTCTATGAGAGCGTTAGAGGCACTAGCAAGCTCACAGTG 462341
462342CTTTCAATTCATTCTTGGTTGTTTCTCCAATTGCCAGGATCCTCGAGAAGGAGTTAGGTGAAGTAGCCA 462410
462411CTTTCAATTCATTCTTGGTTGTTTCCTAGGAGTTGAAGGGTTCGAAGGCTGAGGCTGGGATGATA 462475
462476CTTTCAATTCATTCTTGGTTGTTTCCTCGTAGGCGAGGTGTACCGCTGGCGTGCCCATCGCCATTGCCTC 462545
462546CTTTCAATTCATTCTTGGTTGTTTCGTAGGGGGTTGCGGGTACGCTGCATGGTTGACGAGCCGCTGGG 462613
462614CTTTCAATTCATTCTTGGTTGTTTCCCGAGCCCGAAGGAGCTTGGCGCGCGCGTCTTCAAGGGCGA 462679
462680CTTTCAATTCATTCTTGGTTGTTTCCGATGGCAACGAGGTTGACGTGCACTTCGACCACCTGGCGCA 462746
462747CTTTCAATTCATTCTTGGTTGTTTCGCGTTGGAGAGGCTGCTGGAGGAGCGGAGGGTTGACGCGAG 462812
462813CTTTCAATTCATTCTTGGTTGTTTCGCGTAGACCTTCAGCAGCGCCCCCCTGCTGGCCGCCTTGCCCAG 462881
462882CTTTCAATTCATTCTTGGTTGTTTCCAGTAGCATGCCGCTATACTACGAAGTGTTCGTGAAGTGC 462946
462947CTTTCAATTCATTCTTGGTTGTTTCACGCAGTGTAACCCGGGAGAGTACGCGTTCAACGTGTCAGGTCAG 463016
463017CTTTCAATTCATTCTTGGTTGTTTCATCATGGACTTCTTCAACCGCGTGAGCGTCGTTGAGCATA 463081
463082CTTTCAATTCATTCTTGGTTGTTTCCGGGGTACGTGGTCACAACCGCATCACCGTGTGTGCAGCGAAC 463149
463150CTTTCAATTCATTCTTGGTTGTTTCAAACCAGCGCCGTGCCTCGGAAACGGTGATTATGTAGAAATAGC 463218
463219CTTTCAATTCATTCTTGGTTGTTTCCTACGAATAGCATAGGCGGGCACCGTATCTACCTACCCGAGTATGG 463289
463290CTTTCAATTCATTCTTGGTTGTTTCGCAACCCGGCCTAGCTGTAGCCATGCTTGTATGCTTCGCCATATAC 463360
463361CTTTCAATTCATTCTTGGTTGTTTCAATAGCTCCACTACTTGGTCAACGGCGTACCCCATCCACTT 463426
463427CTTTCAATTCATTCTTGGTTGTTTCAGGCGAAGCCCGACGAGGTTGCCGCCGAGATATCTGGTATCC 463493
463494CTTTCAATTCATTCTTGGTTGTTTCTAGGATAGAGACGGTGAAGGGCAACGGGGCGTTCTTCGAGACTAGTG 463565
463566CTTTCAATTCATTCTTGGTTGTTTCTGATTCTCCCACCCGGCTGAGCGGTGATGACGGCAGCCTCCACT 463634
463635CTTTCAATTCATTCTTGGTTGTTTCAGGGCAGTAGGATTAGCGCCAGGAGTGGCGCGAGGGTTATCAAAAA 463705
463706CTTTCAATTCATTCTTGGTTGTTTCTACCGACGAGCAGACGGCTACGCCGCGCACCCAGCGAGAGGCTATCGA 463778
463779CTTTCAATTCATTCTTGGTTGTTTCTCCGCGCGCGAGATCCATCTCTCCCGCCCCCGCGCTTCGGGTAG 463847
463848CTTTCAATTCATTCTTGGTTGTTTCTCGCTCGAGGAGGTGAGGAGGCTGGCCCAGGAGGGTAG 463910
463911CTTTCAATTCATTCTTGGTTGTTTCGTCGCGTAGTATACGCGCCGCGGTGAGCACCCCGAGCTGCTC 463977
463978CTTTCAATTCATTCTTGGTTGTTTCCTGGCCGTGGCCCCTCTCGCAATCGGCCTCAGCTTCCTCC 464042
464043CTTTCAATTCATTCTTGGTTGTTTCGGAGAAGATGGCGGTCTCAGGGCCGCCGCCCGCGAGGCGGTCCCA 464112
464113CTTTCAATTCATTCTTGGTTGTTTCATAGGGGGTCGTCTGGCAACACGACCTTCGAGATAACGTTCAACGTGACGAG 464189
464190CTTTCAATTCATTCTTGGTTGTTTCCATCGAGGCTCTGGACTACCTCGCCGAGATGATAGACTATAGGG 464258
464259CTTTCAATTCATTCTTGGTTGTTTCGCCAGGCCCGAGGCGGTGAGGTTTGACAACGTGGAGAGGAACGGA 464328
464329CTTTCAATTCATTCTTGGTTGTTTCACCTTGGCGTCCGGCAGTGGCGGGGCCGACGGCCCCACCAGGCCCCGC 464401
464402CTTTCAATTCATTCTTGGTTGTTTCGGATTGTTCTAGCATCTGCTCCGAACCCAAATCATAATTCG 464467
464468CTTTCAATTCATTCTTGGTTGTTTCCGTGGCATAGTGATAGTGGCAACGCATACTGACATATTCCACGTCGGTC 464541
464542CTTTCAATTCATTCTTGGTTGTTTCTACGGCAGGAGCGCCGAGCAGGTTGAGCTCGCGAGCCTA 464605
464606CTTTCAATTCATTCTTGGTTGTTTCTCTAGCTCTACGCTCACGTTGAGGGGCACGGCTCTCACCCC 464671
464672CTTTCAATTCATTCTTGGTTGTTTCCATGGGCGCGGTTGAGACCTTCGAGGACAGGATAGCCTCGA 464737
464738CTTTCAATTCATTCTTGGTTGTTTCTCTATGGTGGATGGCGAGGACGGCGACATCTGGTACGAG 464801
464802CTTTCAATTCATTCTTGGTTGTTTCCCGTGTCCTGGTCACCAACCAGCTCCTAGCCCCGGGCGTGCGCGTGCAGCTCTTCGTA 464884
464885CTTTCAATTCATTCTTGGTTGTTTCACGAGGTGAGAGACTTCACAGAGATAGCCCGCATAGTAGCAAAAACGC 464957
464958CTTTCAATTCATTCTTGGTTGTTTCTGGAACCGCCGCCACCGTTGGCCTGACGCTATTCGTGATTG 465023
465024CTTTCAATTCATTCTTGGTTGTTTCTCCGGATCCCCGCACCGCGTATAGAGGGTATGCGCGGGGGTATAA 465093
465094CTTTCAATTCATTCTTGGTTGTTTCACATGGAGGAGCCAAGGCTCATAACCGCGATACGCGAGAATG 465160
465161CTTTCAATTCATTCTTGGTTGTTTCCAGAAGTCTTACGACGGATACTAGTGGTGCAAATAATG 465223
465224CTTTCAATTCATTCTTGGTTGTTTCACTACACGACCCTGCAAATTCCCATCGTGTCATAGTGTCATA 465290
465291CTTTCAATTCATTCTTGGTTGTTTCGCGGTCTGGAGCCCGGTGCACGGATCTACATCTACGATGT 465355
465356CTTTCAATTCATTCTTGGTTGTTTCCTGGCCGCCGCACTTGGCGTTGAGGGTGTGGAGGCAAGCG 465420
465421CTTTCAATTCATTCTTGGTTGTTTCACGAGGCAGTGTGTTAGTGACGATAGGCCGGTGTGTAGCGAGA 465488
465489CTTTCAATTCATTCTTGGTTGTTTCTTAACAGCGTACTTCAGCGCTTCGCGGACGCCAACGCGTAC 465554
465555CTTTCAATTCATTCTTGGTTGTTTCCGCGTTGGTCTTGTAGCTCTCTGCGCCGGCGTCCACGCGGGAGTCG 465625
465626CTTTCAATTCATTCTTGGTTGTTTCCCCGCATGGGTCTACCCCTCTCCCGAGATGCGCAAGGTAGCGACC 465695
465696CTTTCAATTCATTCTTGGTTGTTTCGTAGCTCTCGATCCACCCGCGGAACACAGGGTCGGCATG 465759
465760CTTTCAATTCATTCTTGGTTGTTTCCAGCCTCACTAGAATCTCGTATATCTCGCGGGCTTGTTGTAT 465826
465827CTTTCAATTCATTCTTGGTTGTTTCGCTCGGTGTTCAAGTCGGTGGTCTACGACCGTTGCGGGTGCGTCCAGA 465899
465900CTTTCAATTCATTCTTGGTTGTTTCAGTGATATGCTAGTCGGTGATTTATGGTGATAATAAACGTGCTA 465968
465969CTTTCAATTCATTCTTGGTTGTTTCGTACTGAAAAGTGTTGGTCTACTTGATAAGCTAAGAATGTAT 466035
466036CTTTCAATTCATTCTTGGTTGTTTCAATACAAAACAATCAAGATATTGACGGGCCTGCCTTTAGTAAATGTAA 466108
466109CTTTCAATTCATTCTTGGTTGTTTCTTGTAATGCGGGGTGAGGGCATGAAACTGAGAGAATTAGTA 466174
466175CTTTCAATTCATTCTTGGTTGTTTCGACGTCGTAATGCAGATCATGACGCGGTGGTTGCTAACGCCACT 466243
466244CTTTCAATTCATTCTTGGTTGTTTCTGCGGATAGAGGAGGGGAGGATAACGTTTCCGATCGGGGTG 466309
466310CTTTCAATTCATTCTTGGTTGTTTCAAAACGATCCGTGTCGAGTCCGGCCTCGCGATAATCAAGGTA 466376
466377CTTTCAATTCATTCTTGGTTGTTTCAGCGTCACGTCCCAGCTTCTCCTGCCGTAGGCGGTGTACGCTGGTTGGTCTGGA 466455
466456CTTTCAATTCATTCTTGGTTGTTTCTCGCTAGGAAGGGCCGCGAGTGGGTGGCTGCCGTGAGTTATGGG 466524
466525CTTTCAATTCATTCTTGGTTGTTTC466549
Left flanking sequence : Till position 461092 (length bp)
GGCCACCTCCTCCAGCTTCTTCACAACCTCCCGGATGAGCACAATCACCTCCTTGTAGGCCTTAATCCAG
GTCTTCGAGGGTTACTCTGCAACCGCATGC
Right flanking sequence : From position 466549 (length bp)
TGCATTCTTGCCGTGTGGTTATAGGGTCTCTCTTCTATTTATTCTTTTCTCTGTTGTCTTTGTTTCTGTG
ATTTGAGTGTAGTCGTGCCGGGCACAGATG

Print the CRISPR sequence : From position bp To position bp