Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_015954_1                                                                                                                 top


Strain : halophilic archaeon DL31 RefSeq :NC_015954 (chromosome circular)
CRISPR id : NC_015954_1
DR consensus (37 bp) : GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACNumber of repetitions :61
Begin Position : 190284 End Position : 194678

190284GTTTCAATCCCGTTCTGGGTTTTCTGGGCGTCGCGACCTGGCACTCATCCACGATTAATTGGATTGAGTGCCGG 190357
190358GTTTCAATCCCGTTCTGGGTTTTCTGGGCGTCGCGACGCCTTGGACGGTCGGGATAGCCGGGACGATGTCTGGAG 190432
190433GTTTCAATCCCGTTCTGGGTTTTCTGGGCGTCGCGACAGTTCGGTGCTGAGTGTTTCGTCGGTCATTTCAGT 190504
190505GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACAGTTCATCGAGTTCGAGGTCGATGTTATTCGGCAT 190576
190577GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGATTTGACTCCGGCGGGTCGGAACGGTTTACGACAT 190649
190650GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACACTATGTCGCGGATATCCTCGCGCCGCTGCCGG 190719
190720GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACACGTCAGCGACGTGCTCCTCACGGCGGAGTGGTGAG 190792
190793GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGGACGACGCCCATCTCGTTGCCGATAACCTCCTGAC 190865
190866GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACAAACCGCATGTCGGGATAGCTCCTTCTCACACCACAT 190939
190940GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCTCATCGAGTCCTTCGCCGTCGTCAGTTTGCCAGA 191011
191012GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCTAGCCAACCGCCGCGGAAATCTGTGCGTTGAAGC 191083
191084GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGGCCCACAATCGGGTCACAGTACAGCCGTCTGACT 191155
191156GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGGGGGTTAACACCGTAGTAGTACACTAAGGGTTAA 191227
191228GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCCCCCGACACTGTGCAGGTCACGATTACGATTCCC 191299
191300GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGTCAGTCATATCGGCCCACGCCGCTGCGGAGAGGCCG 191373
191374GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCTGAAAGAGGAGAACGCGACGCTTCGAGGCTACTA 191445
191446GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCGCACGGCTCCCGACGCTGTGCAGGTCACGGTCTCC 191518
191519GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGGCTGAACAGGCGCGACAGTTACAGGAGGCGGAGTC 191591
191592GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACTTCCGGGGTCTAAGAGGCTCACCATAGTTAAAT 191661
191662GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACAACCGACGAGGAGGACAGTTCCCCGACCAAAGAGAC 191734
191735GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACATCGTGGCCGACGCCCGGCGAGGTGTCAACGTCGA 191806
191807GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCACGGCCCGCGACCTCTTCGTCTCCCGCTACGAGGA 191879
191880GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCTCACGTTCAAGAGCCGCCGCCAGATAGTCCACGGTCG 191954
191955GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGAGGCCGAGGAGGACCGCGAGGCTCAACTCCGG 192024
192025GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACAGAATGATATGTCGCTTCCCGCGGGCGGCGGTCA 192095
192096GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGCTACTCTATGAATATAGAGAGGTCCCTCGTCCTCCT 192169
192170GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCGAGCGACACGACCGAGGCCGGCGACGCGGTCGGCAT 192243
192244GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACTGAATTTGCAAGTAGGCACGCCTCACCAGCATCGA 192315
192316GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCGCCCACGAAGAACAGGAAGATTGCCAGCACAATCAT 192389
192390GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGCAAGACGCAGAGCTTGCGCTGGTCGCTGACTT 192459
192460GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCTCGCTCAAGCGACTCCCTGTCTGGTGTGGGTCCAG 192532
192533GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGGCGGTTGGCCTCGGTGAGCAGAACGATACGGCGGG 192605
192606GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCTCGCTCGGGTCACGGTCAAGGCTCACGCCCTC 192675
192676GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCGGATCAAGTAGGGGTTCGCCCGCCCACCGGCGAG 192747
192748GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCGACGTTCGAACCAACCCGAATGGACGCCTTGAATT 192820
192821GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCCTCGGTCCAGCCCTCCGGGAGCGACGACCACGCC 192892
192893GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGTCGCCGGCAACCCACTACAGAACGTCGATACGGT 192964
192965GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGTACTATGTACCACATAGAGGGAGACACACTATGTC 193037
193038GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGCCGAGGAGCGACGTGCTCGTGACGGTCGCGGCGGC 193110
193111GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCACTAGTGCTCACGGTGGTAGGGTTTGCCTTTAAATT 193184
193185GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGCAGCGGTCAGTAACGAGTAGCCCCGGGCGACCCT 193256
193257GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGCCGTTCGTAAGGGCGTCAGCTGGAATGCTTTCTAG 193329
193330GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACAACCCGGCTCCCATCGGGCGCAACGTCCGTCCCTTT 193402
193403GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGCGCTCCCCTGAGTCGCGTCGTCGTGGCTGTAGG 193473
193474GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGTCGACGACGCTCTGCAGCGTCTCGAGGACCCAGTC 193546
193547GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGGCAAGAAAAACAGCGGCAAGTCTGTTCTCATGGAG 193619
193620GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCGCCCGCTCAGGGCCGCCCGTCGCCGTGGAGAACGT 193692
193693GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCGCCAAGCTCGCCGGTGCCAGCATCCCGAACAAG 193763
193764GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCTCACTCGTCTGGGTCGTAACGCTCACGGCGGACAGT 193837
193838GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGGCTCACGCTACGGCCCTCCGGGGCCTCAGGGTGCCG 193911
193912GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACAAAAAACAGCGAACCGATAGGTGGATGTACCTACCT 193984
193985GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACATCCTCCGTACTTTGCCGGTTGTTTGACTCTGCGCA 194057
194058GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACTAGTAATTCAGTAGATCGAGCGTTTGTCTGTCGTC 194129
194130GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACTCGATCACGGAGCGGATCGCGTCGGCAATATCTCCAG 194203
194204GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCCTCGCCTCGAGAGATATCATACGTGAAGTAGTACG 194276
194277GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACCCGGTTCCCTCGACGACGATCTTCCCGTAGACCGCAG 194350
194351GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACAAGAGCAGGAGCTGGACGACGGCGGTAGCTATCTTCC 194424
194425GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACGTCAATGCGTTCGGATACGAAGCGGGTCGGAACAA 194496
194497GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACAGGCTGGGCGCTCACTGCCGCCCCCCACCGTCGAAC 194569
194570GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGACACCGGGTTGATGACCTTCACGCAACCAGTGTTCAA 194641
194642GTTTCAATCCCGTTCTGGGTTTTCTGGGTGTCGCGAC194678
Left flanking sequence : Till position 190284 (length bp)
GTCGTGCCCTCGCACTCGAACGCCACGGAGCGCGCTCCGAATGGCTCCTCGTCCAGTTTCTGGAAGCCGA
CCCGTTCGCCGGCGCCGACGTCGACGACGT
Right flanking sequence : From position 194678 (length bp)
AGGGGGTGTAAATACGGCGATAAGGGTCAAAAAGCTTTCTCAGTACCGGAAATCTCCCCCTCGTTACGTC
GACTGGGACTGTACACCGAACTAATAAAGG
Print the CRISPR sequence : From position bp To position bp