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CRISPRs details
NC_015979_1
Flanking alignement tool
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NC_015979_1                                                                                                                 
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Strain :
Lactobacillus sanfranciscensis TMW 1.1304
RefSeq :
NC_015979 (plasmid pLS1 circula)
CRISPR id :
NC_015979_1
DR consensus (29 bp) :
GTATTCCCCACGCATGTGGGGGTGATCCT
Number of repetitions :
15
Begin Position :
28011
End Position :
28902
28011
GTATTCTCCACGCATGTGGGGGTGATCCC
ACGGCACACTCGTATTCTGGATAGGCTTTTTTG
28072
28073
GTATTCCCCACGCATGTGGGGGTGATCCT
GGAATTGACGGCTACCATGCTTCTGCCGACATG
28134
28135
GTATTCCCCACGCATGTGGGGGTGATCCC
GTCCCACGCAAGTCAGTCGCAAATTGTACACG
28195
28196
GTATTCCCCACGCATGTGGGGGTGATCCT
CAAGTCTTGCGAATCATTCAATCCTTCGCCTTG
28257
28258
GTATTCCCCACGTATGTGGGGGTGATCCT
TTCTTCATGTTTCTGCTCGGCTGTGGCTCTAA
28318
28319
GTATTCCCCACACATGTGGGGGTGATCCT
ATCATGGCGATGAATTTGAAACTCAAAAATTA
28379
28380
GTATTCCCCACGCATGTGGGGGTGATCCT
ATCTTTTTTTCGTGTTCAAAAAATTCCTTTCC
28440
28441
GTATTCCCCACGCATGTGGGGGTGATCCT
TAACAGTTCTCATGGTATTTTGAGATATACATA
28502
28503
GTATTCCCCACGCATGTGGGGGTGATCCT
ACTACTTGAAATGACGTACCTACAAAACCGATG
28564
28565
GTATTCCCCACGCATGTGGGGGTGATCCT
AAAATTGAAAAACTTGAAGAAGCACTTGTTAGA
28626
28627
GTATTCCCCACGCATGTGGGGGTGATCCT
ACTCATAAAACAAGCCTACAAGTTGAATTTGA
28687
28688
GTATTCCCCACGCATGTGGGGGTGATCCT
ATAAATGTAATGAAAAGTGAGAGGGGGCTTAAA
28749
28750
GTATTCCCCACGCATGTGGGGGTGATCCT
AAATTTTTCAGTTCACGCTTTTGGCTTTCATCA
28811
28812
GTATTCCCCACGCATGTGGGGGTGATCCT
AGCAAGTACAGCATTATCTTATATCGTTGGTTA
28873
28874
GTATTCCCCACGCATGTGGGGGTGGATGT
28902
Left flanking sequence : Till position 28011 (length
bp)
TGTAGCCACGTATAGTGTGGGAGCAATAAAGTTGCGTTATGACCACTGACCGCAAGGTCGTGAGTTACAA
GCCTCTCACTTTAGTGAGGGGTAGTTGACT
Right flanking sequence : From position 28902 (length
bp)
AAGCTGATTCCTGAGACAACTTTTAAGAGAGCGTATAATGAATAAATCGTCTCTCAAAAGGAAGGAATTT
TTACATGCCAACTCGTTACGACAAAGAATT
Print the CRISPR sequence : From position
bp To position
bp