CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_016077_1
Flanking alignement tool
Page manual
  
Home Page
NC_016077_1                                                                                                                 
top
Strain :
Acidaminococcus intestini RyC-MR95
RefSeq :
NC_016077 (chromosome circular)
CRISPR id :
NC_016077_1
DR consensus (36 bp) :
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
Number of repetitions :
53
Begin Position :
1011010
End Position :
1014466
1011010
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
TCCAGTTTTTGGGGTACACATCAGACTTCT
1011075
1011076
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
TGCGCAAGCGTCTGTCGCGGAGCAAGCTTT
1011141
1011142
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
TGAATACGGCATTGACATTGACACCGATAC
1011207
1011208
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
AGCTGTGCAATCCTTGTCGGATGGCTGGCG
1011273
1011274
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CGGGTCAAAGAATCTATCGCGGAAATGGG
1011338
1011339
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
GCCGATGGTAATGGCCTTGCCGGCGGCAAT
1011404
1011405
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
AAATGCAGCTGAAAAGAATATAATAACACT
1011470
1011471
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
GTTCATTCATACCCATTGCTTTTACCACTT
1011536
1011537
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CTGGATTCTTGGCTAGCATCACGACATGT
1011601
1011602
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
TTACAAACTGTTTGATTGCCTTATACTGTC
1011667
1011668
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
GCTGGTCGGTCTGATCTCACCCTTGATGGC
1011733
1011734
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
AGTTGAGCTCCTGTTCATACAGGCTGATGT
1011799
1011800
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
GGACTATCTGACGAAGGCGCTGATTGGCTA
1011865
1011866
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
TTCTCTGCTTGTTACTAATGCTCCTTGCA
1011930
1011931
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
ATAGGAGGGCATTCGATGAGCCTTGAATGC
1011996
1011997
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
GATGAGAGATGCTGCTGCTTGCTGGTTTCC
1012062
1012063
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CGGCTATTTGCTGATTCGTAAGGCCCCGTT
1012128
1012129
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CCCGGCCACTTCAAACCCTTTGGCGTCAT
1012193
1012194
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
TGATCATATACTCTTCAAAAGCCGTTAAGT
1012259
1012260
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CAAGCTCCTGAAGCTCCGGTAAGTTGGCCG
1012325
1012326
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
TCAAAACCCTCGCCAAAGAGGTCAACATTA
1012391
1012392
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CGTCGGCGTCATCCACGGTTTTGCCCTCCC
1012457
1012458
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CATCCAGCCCGGGACGAAAATCAAGATTAG
1012523
1012524
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
GGGTATAGCACTGTGTTACTGCCTATCACA
1012589
1012590
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CTTTTTCATTAGCGTATCCGAAAGCTCATC
1012655
1012656
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
GGTCGGACTGGACGGTTTCGCCCCAGAGAC
1012721
1012722
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
ATTAAGCCCTTCGGAAAGCTTTTCTGGGT
1012786
1012787
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
GGAATATCATATCGTCATAGCAGACGATGT
1012852
1012853
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CTTAATCTCGCCCCCGAGGAGCCGGTCGA
1012917
1012918
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CTTCACCTTCTCCCAATTTTACTACATTT
1012982
1012983
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
ACAGTTTGGCGAATTCTTCCAGAAGCTTCA
1013048
1013049
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
TCAACGATGTTCAAAGCCTTGAAATATGAA
1013114
1013115
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
AGTATGACGCTTTTTCCCAATGGCAATTGC
1013180
1013181
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
ATATCCCCGAATATATCGTTCCTTATGACGA
1013247
1013248
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CATTTTCATCTCTGGTATTAATGGACGTAG
1013313
1013314
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
AGGATTTCCGTCAGCCACGAGCAATGGTTA
1013379
1013380
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CTGCTGTCTGAAATGCGAATGACAATAAT
1013444
1013445
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CATGCTCCGCATCGACTGCTGAACGTGGAG
1013510
1013511
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
TCAAAATCTAGGTTGCGTTTAATGGAATCC
1013576
1013577
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
ATCTTGCCCGTGATCCGTCGGGCCAACAAA
1013642
1013643
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CTTAACCACAAAAATGACCTTTAGGAGGT
1013707
1013708
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CAATCTGGCCACGAACAAGCCGCCGACGGT
1013773
1013774
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
TTCCTGCTGTGTAAGTTTTGATAATGCTC
1013838
1013839
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
TGATAATAATCTCCGGTGTAGTTTTTGCC
1013903
1013904
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
TGTCATACTCAGGGTGCTGTTGTTGAATA
1013968
1013969
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
GAACGCTATGCCGTTGACCTTCACGTTCGA
1014034
1014035
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
AGTCAGTAAGGCCAAAGAGCTGCAGTCTCA
1014100
1014101
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CGCTGTCGCTGACTCCGTTCTGGCGTCTGA
1014166
1014167
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
ACTTGCCACGCAAGTTCCAGACTTCAACAT
1014232
1014233
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
AAACATCGGACACAGAGCGCTTGGCCGCGT
1014298
1014299
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
CGACGTTGACGTCAGCGATTTGCCTGACTG
1014364
1014365
GTTTGAGAGATATGTAAATTCAAAGGATAATCAAAC
AATGAAAGTCAAAGGGCTCCCCAGGGCCCT
1014430
1014431
GTTTGAGAGATATGTAAATTCAAAGGATAACTAAGC
1014466
Left flanking sequence : Till position 1011010 (length
bp)
AGGAAAAGAGGGTTCTTATAGATAACGATTTATGTGTATTATAAATTAGCACCTTTTGAATTTATCTACA
CGGAATGATAATCCGTTGATCAAATTTGAG
Right flanking sequence : From position 1014466 (length
bp)
GTAAAATGTTTTTCGGTAGGGAAAAATAGTCCTTGCAGAATAAAAGGGAGGCCCCTATTGTTAAGATAGT
GTTAACGGCACGAATATCAAAACAAAGGAA
Print the CRISPR sequence : From position
bp To position
bp