Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_016110_3                                                                                                                 top


Strain : Streptomyces flavogriseus ATCC 33331 RefSeq :NC_016110 (plasmid pSFLA01 line)
CRISPR id : NC_016110_3
DR consensus (29 bp) : GGGGCCATCCCCGCGTGCGCGGGGAGCAGNumber of repetitions :12
Begin Position : 133924 End Position : 134626

133924GAGTTGTCCCCTGCGGGCGCGGGGAGCAGGCGTCCTCCACCTGCTTCCTGCCGCTCGGTCCGGA 133987
133988ACCACCATCCCCGCGTGCGCGGGGAGCAGGTCGCGGTGTCGGTGGCGGTGGACTTCCGGGT 134048
134049GGGGCCATCCCCGCGTGCGCGGGGAGCAGGTCGGTCTCGCCGTAATCAATCCAAGCGGGCT 134109
134110GGGGCCATCCCCGCGTGCGCGGGGAGCAGAAGGGAGGGCCGGCGGTTGCACGCACGATGGC 134170
134171GGGGCCATCCCCGCGTGCGCGGGGAGCAGGCGCTCAGCACCTCCGGAGAGTCCCGGGTGGT 134231
134232GGGGCCATCCCCGCGTGCGCGGGGAGCAGTTGACAACGGACTTCCAGCGCTTCGGATACGC 134292
134293GGGGCCATCCCCGCGTGCGCGGGGAGCAGACGCCTGCAGCAGGTACGTCGTCCCCGCCTTT 134353
134354GGGGCCATCCCCGCGTGCGCGGGGAGCAGACAAGCGCACGTTCCCGGTCCGCGTACGTGAT 134414
134415GGGGCCATCCCCGCGTGCGCGGGGAGCAGACCGCCCCGCCGGTCCCCGGACAGCTCGGCAT 134475
134476GGGGCCATCCCCGCGTGCGCGGGGAGCAGTCCTTGAAGTCCACGCCGTGCCGGTCGGAGGG 134536
134537CGGGCCATCCCCGCGTGCGCGGGGAGCAGAGCGGGCAGTGGTAGCGCATTGTCGGGCCGTA 134597
134598GGGGCCATCCCCGCGTGCGCGGGGAGCAG134626
Left flanking sequence : Till position 133924 (length bp)
AAAATCTAGTGGCGCGTCAGGTGCTGTGGCCTTGGTTCCACGGAAGCTCCACTTCCTCGCTGGAATATGG
CCGGATCCGGATAGACCAGCGCGGACGTGG
Right flanking sequence : From position 134626 (length bp)
ACTGCGCGACCTGCGGCTTTATCGCCGCAGGGACTCAGTTCTGAGTACTTTCAAAGGAACAGACATAAAA
CCCCTTTCGCCCATCACGCCACCTGAGGTG
Print the CRISPR sequence : From position bp To position bp