Institut de Génétique et Microbiologie

CRISPR details


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NC_016148_1                                                                                                                 top


Strain : Thermovirga lienii DSM 17291 RefSeq :NC_016148 (chromosome circular)
CRISPR id : NC_016148_1
DR consensus (30 bp) : GATTCAATCGAACCGATACGGAATGGAAACNumber of repetitions :24
Begin Position : 256316 End Position : 257821

256316GATTCAATCGAACCGATACGGAATGGAAACCGTCCCGTCGCTCACATTGTGGGCACATTACCA 256378
256379GATTCAATCGAACCGATACGGAATGGAAACTGTTTTGGCGCCCGCCACGTTTCGCTATTT 256438
256439GATTCAATCGAACCGATACGGAATGGAAACGTTACGCTCACGATAGGCAAGCTCCAGTATTT 256500
256501GATTCAATCGAACCGATACGGAATGGAAACATATTCTTTCGCCCTCAAACCTCAAAGGGCGGC 256563
256564GATTCAATCGAACCGATACGGAATGGAAACAAATAAACTGAGCTTTGTTTAGAGTTTCTTT 256624
256625GATTCAATCGAACCGATACGGAATGGAAACTAGCGCCGGCATGAAGAAGGGCGCCCCTCCTA 256686
256687GATTCAATCGAACCGATACGGAATGGAAACTGCCTCCAACATCTCATATCACTCCTTTTTGTTAT 256751
256752GATTCAATCGAACCGATACGGAATGGAAACTTTCTGTTAACTGTCTAGCCCTGACGAAGACCTCTTC 256818
256819GATTCAATCGAACCGATACGGAATGGAAACGTCGCTATCGGATATATTCTTAATTTATCATACG 256882
256883GATTCAATCGAACCGATACGGAATGGAAACTGTGTCAAGCTCTAATGGTAAAGTCTAAATATTC 256946
256947GATTCAATCGAACCGATACGGAATGGAAACCAGTAAACGTCCCAGCCGTCCTCACGTAGCCACTTGA 257013
257014GATTCAATCGAACCGATACGGAATGGAAACAACATTTGGTGCAAGGCGTCATCGATGTCGTTAAG 257078
257079GATTCAATCGAACCGATACGGAATGGAAACACCTTTCCAAATATTATATTTTATTGTCAAG 257139
257140GATTCAATCGAACCGATACGGAATGGAAACTTCAGCGCTGCAAACGGAAGGATATAGGAGACA 257202
257203GATTCAATCGAACCGATACGGAATGGAAACCAATATCCAACCTTTTCATCGCTTATGCGGACAG 257266
257267GATTCAATCGAACCGATACGGAATGGAAACGCATCCCATCCTTTCCTTTCTTATTGTCAAGGTACGAT 257334
257335GATTCAATCGAACCGATACGGAATGGAAACGTGCACTCCTCCGTACCATTTAGATAGTACGGAGCATA 257402
257403GATTCAATCGAACCGATACGGAATGGAAACCTGAAAATATTTTTTCAGCGCTGAATATGGGAGAATG 257469
257470GATTCAATCGAACCGATACGGAATGGAAACCCTGATTTGTTCCTGATCCAACTGTGGTAATTG 257532
257533GATTCAATCGAACCGATACGGAATGGAAACTACTACACCCCATCCTTTCTTATATTTTCTTGTC 257596
257597GATTCAATCGAACCGATACGGAATGGAAACTCGCGCCGATCGGGAGGCGTTGTGAAAAAGAGGAGCCC 257664
257665GATTCAATCGAACCGATACGGAATGGAAATTGTTCTCTCTGTATTGATATCTCCCTTTGGCG 257726
257727GATTCAATCGAACCGATACGGAATGGAAACCCTTGGACAGCCACCACCTTGCCCACATAGGCAAA 257791
257792GATTCAATCGAACCGATACGGAATGGAAAC257821
Left flanking sequence : Till position 256316 (length bp)
TTGTAGTTGTGGTCTGCCTCCGCGGAGAGTGTTTCTACGCAAACATAGTTCTGTTTTTCACTTATTCTTA
AGTCTTGCAAATACTGGTATTATAATAAGG
Right flanking sequence : From position 257821 (length bp)
ACTCCTATGCTTTGACTTATCTATGATTTTCGGTGTTTTTTCTAATAGATACCCAAAATGTTTTTCCTTT
CCAGTCTCCAAGTCCCTTAAGGCTCTTACA

Print the CRISPR sequence : From position bp To position bp