Institut de Génétique et Microbiologie

CRISPR details


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NC_016148_2                                                                                                                 top


Strain : Thermovirga lienii DSM 17291 RefSeq :NC_016148 (chromosome circular)
CRISPR id : NC_016148_2
DR consensus (30 bp) : GTTTTAGACCTTCCTATAAGGGATGGAAACNumber of repetitions :46
Begin Position : 279012 End Position : 282019

279012GTTTTAGACCTTCCTATAAGGGATGGAAACACTATGGCTTTGGCTCTTTTATTATAGCCATTATCTG 279078
279079GTTTTAGACCTTCCTATAAGGGATGGAAACACTACATTGGCAATTTCTTTTGCTGACTTATTTTTA 279144
279145GTTTTAGACCTTCCTATAAGGGATGGAAACGGTTTTTCAACAACTGCAGCTTGGGGCTCTAAACCAA 279211
279212GTTTTAGACCTTCCTATAAGGGATGGAAACGGGGCTTTAGGCGCATCCTCCTGGCCCGTGTCACCGT 279278
279279GTTTTAGACCTTCCTATAAGGGATGGAAACTCGAACTGTTCCTCAAGCCCCCTTGTGCTGAGCCAC 279344
279345GTTTTAGACCTTCCTATAAGGGATGGAAACGAGCGGTGACGGTGCCAGCTAGCGGGACCACAGCCA 279410
279411GTTTTAGACCTTCCTATAAGGGATGGAAACTATGTCAGCGCCATATGTCGAGGATATGCATTTTG 279475
279476GTTTTAGACCTTCCTATAAGGGATGGAAACACGACATAGATGCACTGCTTCAGGAGCTCTTCGATG 279541
279542GTTTTAGACCTTCCTATAAGGGATGGAAACATGAAAATGACATAACCAGATACAAATGAAGGCGG 279606
279607GTTTTAGACCTTCCTATAAGGGATGGAAACTAGACTTCATGCGCGACGACTTCAGTCGTCTGCCCC 279672
279673GTTTTAGACCTTCCTATAAGGGATGGAAACTAGCAATAAGAGAAAGGAGTGAAAAACATGACTCTA 279738
279739GTTTTAGACCTTCCTATAAGGGATGGAAACATGCCGTGCGGGCTGAGAGGTGTCGCCGTTCTTTCTA 279805
279806GTTTTAGACCTTCCTATAAGGGATGGAAACTTTGATGTGCGCTACCTGTTTTCCTCCCCAAAACAA 279871
279872GTTTTAGACCTTCCTATAAGGGATGGAAACTGATTTTGACGAGGCCATGCTTAACGTTCTTATCTT 279937
279938GTTTTAGACCTTCCTATAAGGGATGGAAACCTCCAGCGTCACGACGTGGTAACCGTTGGCGCATG 280002
280003GTTTTAGACCTTCCTATAAGGGATGGAAACATTACTCCTATGGTCTAGAACAGAAGCTCGTACACA 280068
280069GTTTTAGACCTTCCTATAAGGGATGGAAACTCGACAACAACGCCTGGTACTGGAAGGGGCAGCTG 280133
280134GTTTTAGACCTTCCTATAAGGGATGGAAACAAGGGGCCAAAAGTACCAGTGCTAACAACGCGAAAGC 280200
280201GTTTTAGACCTTCCTATAAGGGATGGAAACTAAATATGCCCGCCGCACCCTCACCTGCTATGGCCAC 280267
280268GTTTTAGACCTTCCTATAAGGGATGGAAACACGCATATTTTGCGGCAATAATACTGTCTGCGGATA 280333
280334GTTTTAGACCTTCCTATAAGGGATGGAAACCGCAATATGACCCACAAACCGACACAGTGTCTTTTAT 280400
280401GTTTTAGACCTTCCTATAAGGGATGGAAACTTGCAACAGAATCAGAGTTTTCGCTGTGGTCACATC 280466
280467GTTTTAGACCTTCCTATAAGGGATGGAAACTTCGTAGCGGATATCAAACTGGCTGAACCCCATAAGCC 280534
280535GTTTTAGACCTTCCTATAAGGGATGGAAACGTGGCGTTCGTATGGTTGGCCAAGAGCGGCAAGCTGA 280601
280602GTTTTAGACCTTCCTATAAGGGATGGAAACAGTTCCCGCCTCATTTCCAGTAGCTCCCGCACCGCCT 280668
280669GTTTTAGACCTTCCTATAAGGGATGGAAACCTGGCTAGACCTATAATCCTTGAGCATGACGGAAA 280733
280734GTTTTAGACCTTCCTATAAGGGATGGAAACCTGCTCCATCTCCCCATCGAGACGGGTTCTTCCAT 280798
280799GTTTTAGACCTTCCTATAAGGGATGGAAACTACATCCTCCTAAGTTTTTTGGTCGGCACGTACTTA 280864
280865GTTTTAGACCTTCCTATAAGGGATGGAAACACAGTATGGTAACACCGCAAATCATAAGCATCATA 280929
280930GTTTTAGACCTTCCTATAAGGGATGGAAACCGGAAAAACAACCTTAGGTAGAATAGTCGCAAAATA 280995
280996GTTTTAGACCTTCCTATAAGAGATGGAAATAGTGTTTTTATGACCCGACCGATGCCGCGCAAGCA 281060
281061GTTTTAGACCTTCCTATAAGGGATGGAAACTCCAAACACACCTTCCAATCTAAATGTTCAATCTGAACC 281129
281130GTTTTAGACCTTCCTATAAGGGATGGAAACCCGCTCTATGGCGTCCGGCGGCCAACCGTGTTCATT 281195
281196GTTTTAGACCTTCCTATAAGGGATGGAAACACCAGTTTCGCGTTTTTCTGCGCAATAGCCACCTC 281260
281261GTTTTAGACCTTCCTATAAGGGATGGAAACGTGCCCATGCTGCAGAGTGTGCCGGGGCTACTTCAG 281326
281327GTTTTAGACCTTCCTATAAGGGATGGAAACGTGCTTGAAGGAATTACGCCTGTTTACGCTTTTTCAA 281393
281394GTTTTAGACCTTCCTATAAGGGATGGAAACTTGTTATCTTTGTTACCTCTCTGCGCGTCCTCTTG 281458
281459GTTTTAGACCTTCCTATAAGGGATGGAAACTTTGTTTCCTTCGCGCAAAGGCCGTGGGCCTATAACG 281525
281526GTTTTAGACCTTCCTATAAGGGATGGAAACACAAAAAGGAAAACCCCCTTTATGATCGGGCTAGACC 281592
281593GTTTTAGACCTTCCTATAAGGGATGGAAACTGTCGGCGCTTGGGATATCGGATTGCGGCAGCCTTGC 281659
281660GTTTTAGACCTTCCTATAAGGGATGGAAACACCACCTCGCCCTCCCATGTGATTTTTTCCGGCATAG 281726
281727GTTTTAGACCTTCCTATAAGGGATGGAAACTCCAATTCAATTGCCGTGGCGAGTTCAGCCGACAAT 281792
281793GTTTTAGACCTTCCTATAAGGGATGGAAACCTGAAATAGTCTTTGACTGTGCCATTAACCACGGT 281857
281858GTTTTAGACCTTCCTATAAGGGATGGAAACTGTCGAGGATATGCATTTTCCGGGTAGCCCTCTGAC 281923
281924GTTTTAGACCTTCCTATAAGGATTGGAAACCAAGCTGTCACAGAAGCAGTAGGTCAGTGCCTTATT 281989
281990GTTTTAGACCTTCCTATAAGGGTTGGAAAC282019
Left flanking sequence : Till position 279012 (length bp)
GTAGCTACTGGTTATGGCTCAAAAATAGGACCTTGAAAATAGAATAAATCTATGGAATATTATTGTAGAG
AGAAACTAGAATACGGCTAGAAGAAAATGG
Right flanking sequence : From position 282019 (length bp)
TGCGGCAGGTAGTTTTAAAAGTAGCTTAGAGATGTAAAATTTCTATTCATAAGATACGCTGACAGATCAT
GGGCTCTACAAAGTGCAATAAATAAGTATT
Print the CRISPR sequence : From position bp To position bp