CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_016627_5
Flanking alignement tool
Page manual
  
Home Page
NC_016627_5                                                                                                                 
top
Strain :
Clostridium clariflavum DSM 19732
RefSeq :
NC_016627 (chromosome circular)
CRISPR id :
NC_016627_5
DR consensus (37 bp) :
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
Number of repetitions :
80
Begin Position :
2496169
End Position :
2502078
2496169
ATTAAGTCCCTGTTTTTACTGGATATACTACTTCAAC
GATGTGTACTACGACCTAAGCGCCGCGTGTGTCAGGTGT
2496244
2496245
GTTTCAATCCTTATTTTGCTGGAAGTTCTACTTCAAC
TGCTGACCTTGAGTTTACAGCATTGGCAACTGTTAT
2496317
2496318
GTTTCAATCCTTATTTTATTGGAAGTTCTACTTCAAC
ACGCTCATCACGTACACACGATTTCCAGTCGCACTTAT
2496392
2496393
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC
GTATCTTGAAGGGCAAAGCTTTGTAGGTAATTATGA
2496465
2496466
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC
TACAGCAGTTACTTATGCATTATATCAACAAATAAA
2496538
2496539
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC
CAGCCAATCCCAATATAACCGCCGTGGCTATTTTGA
2496611
2496612
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC
GTTCGCCTGCAAAGTTATTTCCTATTCTAGCAATTG
2496684
2496685
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC
ATTAATAGAAAAATGGAATAATACAGACCCATATATTTA
2496760
2496761
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC
ATTGACGGTCTGCTGTTATACCGTCTATAAAAAAAA
2496833
2496834
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC
TATTAATATAACATATAAAACATTGAGATATTACAAGAAAA
2496911
2496912
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC
TTTCCCACCATGAGAACCAAAATCATCAACTTCTTCTA
2496986
2496987
GTTTCAATCCTTATTTTACTGGAAGTTCTACTTCAAC
CAAGACAGCGACACCTATAGGCAATGGACTATTTTA
2497059
2497060
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
AATAGATGCCAAAGAAATGGGAGACATTGCAAGAAAGA
2497134
2497135
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TTAACTTGTTGCCTGCCATTATGGCACCCTCCTTTCT
2497208
2497209
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
CAAAACAATACGCTGTATAAGGGTCAGTTATATCTAA
2497282
2497283
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
AAGTATGCAGACCGAATCAAGGAAGAACTTAAGGTTAT
2497357
2497358
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TCGGCGAAGAATGGTTTAACAGATTGTCCGAACTCG
2497430
2497431
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
CAGAACCTCCAAACCAAGTGATGTTTAATTTGCGAA
2497503
2497504
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TACGGTATACGCAGGAAAAAAAGACATCGAAGGCAT
2497576
2497577
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TATATTATGGAAGTTTGTGAGACTCACACTCACTAG
2497649
2497650
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
CTGTTTTAATAATTGATATAATATCTGGATCATAAT
2497722
2497723
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
CAGGTATGATGGTGCAAATATTTTCTACGGCTATGTTTT
2497798
2497799
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
ATTTGTAGACGGATTAGGAGCATTAAAGCAAGCCATATA
2497874
2497875
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TTAACACCCTTGTGCTGATTGAGGAGCTGACCGTAAC
2497948
2497949
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
AGGCTTTTTTAAGGAGAATATATGAAGTAATATGTTT
2498022
2498023
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
CAGCATTAATAAGCTGATTTACCTTTACAATAACTTTAT
2498098
2498099
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TTAAAAGTCCCATCTCTAATTTGCATATCCTCACTCT
2498172
2498173
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TTTAGGATATTTTGCCTGTAAATCTAATAGATATTTAGT
2498248
2498249
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
ACGAACTTGAGGAAATAATGGCGGAATTACCGCTGC
2498321
2498322
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TTTAGGATATTTTGCCTGTAAATCTAATAGATATTTAGT
2498397
2498398
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
ACGAACTTGAGGAAATAATGGCGGAATTACCGCTGC
2498470
2498471
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
GAATATAAGTGATAAGTTAGGAAGCTTAACTGATGCAG
2498545
2498546
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
GGAGTTATATTATCTGTTGAATACGGTGTATATGCTTTA
2498621
2498622
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
ATATACTGAGATTAGACATACAATCACCTCTTTTAA
2498694
2498695
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
CGTGTTAATCCGATTGTTAACCTATTTGTCAATTTAGAT
2498770
2498771
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
GATACTATCTCAAAACCCTCGTCGAGAGATCCATCTTCTT
2498847
2498848
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TTAATTTTTTATCATTGCAAAACTGTTTAAGCCAAAAAG
2498923
2498924
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TTAATTTGCACAAGGAGGTGCTGGCAGGGTTTATCCC
2498997
2498998
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
AATATACCAAGATATTCAATGCTAACAGGGATAAAAT
2499071
2499072
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
CTGTTTTTTCAATTTCAAATATTCTTTTTGACATTT
2499144
2499145
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
AACATTTGGAAAATCTTTGGCGTACCATCCATAGACCCGA
2499221
2499222
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
CAAGAGAGATTTAAACAAGAAAAATACAGGTTATTGAA
2499296
2499297
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
AAACACAAAGCGGCGGGGTTGCTTGCAAAAAGCACA
2499369
2499370
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TAGATAATTCACAAGAAAAAGCAAAGGTTGAAAAATATT
2499445
2499446
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TGATTACAGAAATGGGATACAATGCAATAGCAGAAGATAG
2499522
2499523
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
GGGTTGCCATTAAGTGTAAAGATGTCCGTTTATGCAGG
2499597
2499598
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TGAGCATTCTGCAACCAAATGAATGGAAGATACTCAA
2499671
2499672
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TATAGATTGGTTTGAGTTATATTTAGATGATATTT
2499743
2499744
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
AAAAATTACGGAAAAAAAGAGGTTACAATATCTGG
2499815
2499816
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TAATATAACAGGCATATTTACAGTGAGTACGGGCAGCT
2499890
2499891
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
CGGGGGCGTGAATCTATGTAAAGCCATCATGGCAT
2499962
2499963
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
ACCTCTCCATATTTTTGTAATATTCCTTGACCATATTG
2500037
2500038
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TAAATTCGACCATGCGATTTGTTACTGGATCTCCAGC
2500111
2500112
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
ACGATAAATTTGCTCCTGCTCTTTCAACAAGCAGA
2500183
2500184
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
CTTAACCTGCTCGACTGAGAACATCTCGGCTGGAA
2500255
2500256
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
GTTTTTTTAGTTTCGTCATAATTGCCATATTTAATA
2500328
2500329
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
GCCAACAACGTAAGCAAAGGAAATTATTTCTTTGTACC
2500403
2500404
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TTGAAGAAACTGCTAAAAATTTGATTTCTACATTGTTAAA
2500480
2500481
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TACTAACAGAAAAACACCTGATTTTACAAAAATTTT
2500553
2500554
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
AATGCTTCGTGAAACCTCACAATTTCGGTACCTTTATGA
2500629
2500630
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
GCTGACATTTACAATTTTATACAGTTGGCAAATTGGA
2500703
2500704
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
AAGGAGTGAGTATAGCAATAAATACAGCACTAGCAATTGTT
2500781
2500782
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TGCACAAGAGATAAGAAGGTATCTTATAGACTGTGAC
2500855
2500856
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
ACAACTGCGCGCATCATTATCTCAATCAAACACCTCA
2500929
2500930
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TTGGTATACAAAGGAAGTGGAAGATGACGGAGAAGT
2501002
2501003
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
AACATGCAACATATAACAAGGTTTTAGCAGAACAATT
2501076
2501077
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
CCCCTCAATAATCTGGGTAATCTTTTCGTTTCCTTAGT
2501151
2501152
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
AAATAGATGTACTTTATATTGATTTAGAAGCTCAATA
2501225
2501226
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
ACAACCTATTATATATAATAGGTTACGCGTCCATAA
2501298
2501299
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
ACCCACAACAAAGAAAAGATTTTTTCGCAAAATCAC
2501371
2501372
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TCTATGTTGCCACTCTCATCAGGATCGGCCTCGCAAA
2501445
2501446
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TGGATATAGGGCTGTATTAAAAGATGTTGTTAACGGAA
2501520
2501521
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
GCTCATTGCTTTCGCTTCCCTACATGAACTCAAAAA
2501593
2501594
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TTGACCTGATGATTGTACAGTTTTATTCCAATGTAGA
2501667
2501668
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
AGCAGCTCGTCAAAAAGAGCTCGAAGAGCTCCGCCAGT
2501742
2501743
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TGTATGTAGAACTTGATGCGAAAGCACGTCAATTGTA
2501816
2501817
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
CCTTCGATATTTCCCTGCACTTCCATATTTTCTCAA
2501889
2501890
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
ATTAATATGAAAATTCCATCATAATTATTGTAACATAGCA
2501966
2501967
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
TTTTCTCAGGCTTATAATATCTACGAACATTATCACGA
2502041
2502042
GTTTCAATCCTTATTTTACTGGATGTTCTACTTCAAC
2502078
Left flanking sequence : Till position 2496169 (length
bp)
TCATTTATATAATAGCAAGTTTATCTTTAAATTGCTTCGAATTTTTTATTTTTTTACGTAAGTTTTGTAA
AGATAAAAGATTATTGAGTACCAGAAAAGT
Right flanking sequence : From position 2502078 (length
bp)
AGTCCGCGAAGCTTAATCCTTCATACCTCAAGCCTTACAAGCTTTTTTTGACGGACTTTTTTTGAGCTAA
TTTTATTGCAAAACACAATTTTTTCATATA
Print the CRISPR sequence : From position
bp To position
bp