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CRISPRs details
NC_016627_6
Flanking alignement tool
Page manual
  
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NC_016627_6                                                                                                                 
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Strain :
Clostridium clariflavum DSM 19732
RefSeq :
NC_016627 (chromosome circular)
CRISPR id :
NC_016627_6
DR consensus (29 bp) :
ATTTACATCCCACATAGTTAAAGAACAAC
Number of repetitions :
56
Begin Position :
3016571
End Position :
3020204
3016571
ATTTACATCCCACATAGTTAAAGAACAAC
ACCGACTTCGAAGTTATACTGGTCGTTTTGACAATG
3016635
3016636
ATTTACATCCCACATAGTTAAAGAACAAC
TGAAGTATAATTGTGCATTTTTGTTCTTTAAGAAG
3016699
3016700
ATTTACATCCCACATAGTTAAAGAACAAC
GTTGACAGCTAGCACTAGTTATAATGTAATAATTGT
3016764
3016765
ATTTACATCCCACATAGTTAAAGAACAAC
GAGCAATGGAAAAACTGCCTCGAACCTCATAGATGA
3016829
3016830
ATTTACATCCCACATAGTTAAAGAACAAC
TCATGTTCTTTACAGCTAAATCTTCGCTGATTATTACT
3016896
3016897
ATTTACATCCCACATAGTTAAAGAACAAC
TAACGGATTAATGAAAACCCCGAACTGTTGGTATAA
3016961
3016962
ATTTACATCCCACATAGTTAAAGAACAAC
CGGATATGTGCCATCCTTGACCTTCTCCCAGACATC
3017026
3017027
ATTTACATCCCACATAGTTAAAGAACAAC
TTAACTTCTTTATTTTTAATTGCATTTCTCCAATAATC
3017093
3017094
ATTTACATCCCACATAGTTAAAGAACAAC
GTACAGGAGTAAAAATGCCATTGGGTATAGCTACT
3017157
3017158
ATTTACATCCCACATAGTTAAAGAACAAC
TTAACTTATACAAAATTAAAAGACTTTCCAAATGG
3017221
3017222
ATTTACATCCCACATAGTTAAAGAACAAC
TGAAAAAGTATCAGATATGAATATTTTAATACAAAA
3017286
3017287
ATTTACATCCCACATAGTTAAAGAACAAC
GGTTCCTGGTGTAGGAGGTAAAGGCATTAATATTA
3017350
3017351
ATTTACATCCCACATAGTTAAAGAACAAC
TTAATTTCAATCATCTCCTTTTTTGTTATATAATA
3017414
3017415
ATTTACATCCCACATAGTTAAAGAACAAC
TGAGAAACTGGAGACAGAGATTGCGGAACTAAAGAA
3017479
3017480
ATTTACATCCCACATAGTTAAAGAACAAC
GGAATATGAATTCAGACCTAAAAATGCAGAATTTGTCAT
3017547
3017548
ATTTACATCCCACATAGTTAAAGAACAAC
TTGAAGACCAGACAGTCTTCAAAGGAACAGCAAGATATGA
3017616
3017617
ATTTACATCCCACATAGTTAAAGAACAAC
GAAATTGTTTTTGTAATCAACCAATATGATTATTC
3017680
3017681
ATTTACATCCCACATAGTTAAAGAACAAC
TTTGTGGTTCTGGATTTTTATTAATCCTTCATTTTT
3017745
3017746
ATTTACATCCCACATAGTTAAAGAACAAC
GTTCTTGAGTTTGTATAGACAAACTTTTAAATTCTCC
3017811
3017812
ATTTACATCCCACATAGTTAAAGAACAAC
GAATATGTTGGAGATGGTTATACAAGCAGTTGAAAA
3017876
3017877
ATTTACATCCCACATAGTTAAAGAACAAC
TGGCTTGTAGCAAAGTCATATATTCCAACAATATC
3017940
3017941
ATTTACATCCCACATAGTTAAAGAACAAC
CTTTTGTTAGGGCGTATAAGCCGTATTTTGATGATAC
3018006
3018007
ATTTACATCCCACATAGTTAAAGAACAAC
CAACCATCCACACTGTCGACTTCTCGACCAATCCAC
3018071
3018072
ATTTACATCCCACATAGTTAAAGAACAAC
TATGATGGTACAAAGTGGTTCTTATCCCAATATGATA
3018137
3018138
ATTTACATCCCACATAGTTAAAGAACAAC
GCGATATAGTCAACACCCTTCGGCGTGACGAATGTC
3018202
3018203
ATTTACATCCCACATAGTTAAAGAACAAC
GACCCTATAAAAAGCATAAGTTCATATTCATTTTC
3018266
3018267
ATTTACATCCCACATAGTTAAAGAACAAC
CAACATAGATTATACAAATCCGAAGGTCCACGAGA
3018330
3018331
ATTTACATCCCACATAGTTAAAGAACAAC
TAAAAATATCAAATCCAGATGCTAAGCCAGAAGAAAT
3018396
3018397
ATTTACATCCCACATAGTTAAAGAACAAC
TATAGAATAGCTTTGTCTACTGCAAGGCCAATAGAC
3018461
3018462
ATTTACATCCCACATAGTTAAAGAACAAC
GTATTCGTTCTCAAAATCATAATCAATATTCTGCGT
3018526
3018527
ATTTACATCCCACATAGTTAAAGAACAAC
TCTTTTTTATTTGACAGTTCTTAAAAAAGATGTTAAAC
3018593
3018594
ATTTACATCCCACATAGTTAAAGAACAAC
CGGTACCAAAGCCGTGACAGTGATACCGGCATGCCA
3018658
3018659
ATTTACATCCCACATAGTTAAAGAACAAC
TTTAGAAAATAAGATATATTCTTTAATGTCTAAGTT
3018723
3018724
ATTTACATCCCACATAGTTAAAGAACAAC
CGGCCCAACTGAATGTAACCAGTCTGAACTCATCTA
3018788
3018789
ATTTACATCCCACATAGTTAAAGAACAAC
CTTTGAGTCCTACAGATACGCTTGAAGTTACATATAT
3018854
3018855
ATTTACATCCCACATAGTTAAAGAACAAC
AAGGGATAACGGCTCAGGAGGCAGAGAATATTGACC
3018919
3018920
ATTTACATCCCACATAGTTAAAGAACAAC
ACTTCATATTCGTCCGCTGTAGGATGTGCCATGTGG
3018984
3018985
ATTTACATCCCACATAGTTAAAGAACAAC
GGGGAGTCGAACCCCTCGCCTGTTCTGTTTGGTAACGT
3019051
3019052
ATTTACATCCCACATAGTTAAAGAACAAC
CTTAAATTGTTGTCATAGATGTACTTCCAAATGTCA
3019116
3019117
ATTTACATCCCACATAGTTAAAGAACAAC
TCATATTTTATAAACGCAGTAAAAAAAGCCTGCACA
3019181
3019182
ATTTACATCCCACATAGTTAAAGAACAAC
TCAATTTAAAGTTAAATTTTCCGCAGTTTAATTTTT
3019246
3019247
ATTTACATCCCACATAGTTAAAGAACAAC
GACAACCCTAAACAAATGGAAAGTGATGCCCAAGAAT
3019312
3019313
ATTTACATCCCACATAGTTAAAGAACAAC
TCAAAGTTAGAAGATGAAAACATCGAAAGATTTAAAGT
3019379
3019380
ATTTACATCCCACATAGTTAAAGAACAAC
CGTTATATGTATGCAAGACAACGATAAAGGTTATCT
3019444
3019445
ATTTACATCCCACATAGTTAAAGAACAAC
TTGTGCCGACTCTATTGGGAGCAGTGCAAAAGCTAA
3019509
3019510
ATTTACATCCCACATAGTTAAAGAACAAC
AGTGACATTATGCCGCTCGGAACTGGAATAGTTCTTTTAC
3019578
3019579
ATTTACATCCCACATAGTTAAAGAACAAC
TTGATGTCAGGTTTATACTGCAGAACGGAGAAATTC
3019643
3019644
ATTTACATCCCACATAGTTAAAGAACAAC
GAAAATGGAAGAAGCAAAAGTAATTCAAGCATTACA
3019708
3019709
ATTTACATCCCACATAGTTAAAGAACAAC
TGGGTAAAAGCTTGGGATGGAATAAAAAATATATTTTT
3019775
3019776
ATTTACATCCCACATAGTTAAAGAACAAC
GGAGTAGCATGGAATAATGGATATAGAATTTCTTCGAC
3019842
3019843
ATTTACATCCCACATAGTTAAAGAACAAC
CTGAAACGGTCCAGTTTATGCACAATCACAGCACCAAAC
3019910
3019911
ATTTACATCCCACATAGTTAAAGAACAAC
TTTAAACTGCTTGCACAAAAGGCATAAGTGTTTATT
3019975
3019976
ATTTACATCCCACATAGTTAAAGAACAAC
GAGCCACCAGCACATACAAAACCTACACCATCAAG
3020039
3020040
ATTTACATCCCACATAGTTAAAGAACAAC
AGGCAAGTCTAGGAAAACCTCTGAAGCGTTGACGCCCTTTCCC
3020111
3020112
ATTTACATCCCACATAGTTAAAGAACAAC
CTAGACGATATTGATATTTATACAGGTCCTGGTCC
3020175
3020176
ATTTACATCCCACATAGTTAAAGAACAAC
3020204
Left flanking sequence : Till position 3016571 (length
bp)
CTCGTTTTCATAATTCTATTCTAACTTATTTTGACCGTTTTGTCTGTCTTAATTTATGGTATCATTATAG
TCTGCAAGTATTAATGCTTTCTGTGCTATT
Right flanking sequence : From position 3020204 (length
bp)
CCCATTTTCAACAATTCTAAAAAGCTCTATTTTATCCCTTTTTTATAGGATTCATGAGCCTTGAAATCAA
ATAAAACTGCAGTAATCTTCCAATAATGTT
Print the CRISPR sequence : From position
bp To position
bp