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CRISPRs details
NC_016640_36
Flanking alignement tool
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NC_016640_36                                                                                                                 
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Strain :
Arthrospira platensis NIES-39
RefSeq :
NC_016640 (chromosome circular)
CRISPR id :
NC_016640_36
DR consensus (35 bp) :
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
Number of repetitions :
23
Begin Position :
5189874
End Position :
5191453
5189874
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
CATCATCTCGATGGCATGGGAGTGTTCTCAACTT
5189942
5189943
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
CTGCCCAAGGCCTGCCGCCCCTTAAGTCCCTAAAAC
5190013
5190014
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
GTTACATCGTTACAGATGTCTACTTTGGCGGTCGCGA
5190085
5190086
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
CAGTATAAGGTTGCATATGCACATGTCAACCA
5190152
5190153
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
AGGAAGGGTGGATCGTGGTATTGACATGTAAACGAGGTCAA
5190228
5190229
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
TGTTTCATGGTCTACAAGGTCTACAAGGGGGGGCGA
5190299
5190300
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
ATTGGTGTCCTGAGATATCATTGTGGTATCAAGACAA
5190371
5190372
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
TGCTTCGTCCCCTTCGTCCTTGGGACTGGGAACTT
5190441
5190442
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
CTTTGATGTCTTTATTCCCAACGGCTACGGCGGCTTCAAG
5190516
5190517
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
GAAGGAAGAGGCTTTGTCGTGGAAGGAAGCGACAA
5190586
5190587
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
CAGTGAACGATGTAAGCATCATACGGTCCATATC
5190655
5190656
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
CGAAAGACAAAGTTTTTGTCCCCCACCTTCCA
5190722
5190723
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
TACAAGGTCCTCCTCCACGGGGAACGACAAGTATT
5190792
5190793
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
CGGAGGAATGTTTGTTGTTCGGGCAGCAACCTTT
5190861
5190862
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
GAATAGGTCTAGACGCATTCAAGTACCCATCTG
5190929
5190930
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
CAGTTCGCTCCTTAAAGTGCGAACTATTTGGGTT
5190998
5190999
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
CAGGGGGGAAGCCAAGGTCTATCTCGGAAAAA
5191065
5191066
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
ACCAACAGCGGCTTCGTGCCGTTCGTAAACTTTC
5191134
5191135
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
AAAGTTTCGGCAAAGGGGCTGACAAGCCCCTCCTTTT
5191206
5191207
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
AATCGTAGAAATCGTAACTTACAGGTCACTCCATT
5191276
5191277
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
TTCTTTGGGACGACGAGTGCAACTACTCCGAAGAAGA
5191348
5191349
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
GTAATTACTTTACATTAATTTCAAAGATTGATCAA
5191418
5191419
GTTGCCATACGTTCGACTTTCAAAGAAGTCTCAAG
5191453
Left flanking sequence : Till position 5189874 (length
bp)
AGCATTGGATGTCTCCTTTTGGGTATCCCATTGGCTCTGAAACAGTTTAGCACTACTTCCGTTCAAAAAG
CGATCGCTTTTTGACATTTACAAAAAAGTA
Right flanking sequence : From position 5191453 (length
bp)
AGCATAAGAACGAAATCCTTGCTCTGAAGGGATTCTAACCCACCAATTCTATAGGGGTCAAGTCAGTACC
CCAATTATTGACATAGATTAGCAATAATTG
Print the CRISPR sequence : From position
bp To position
bp