Institut de Génétique et Microbiologie

CRISPR details


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NC_016645_6                                                                                                                 top


Strain : Pyrobaculum sp. 1860 RefSeq :NC_016645 (chromosome circular)
CRISPR id : NC_016645_6
DR consensus (25 bp) : GTTTCAATTCTTTTGTAGGTTCTTCNumber of repetitions :26
Begin Position : 837468 End Position : 839153

837468ATTTCAATTCCTTCAAAGCATCATCGCCGACGTTGTCCCAGCGACATCCTCAAACACAGTAGTTACGTTTCAATATC 837544
837545TTTTATAATCTTTTATAAGTTCTTCAAGAGGGGCGGCGGCTTACCCACAACGTCCTCTGTCATAAGCGT 837613
837614ATTTCAATTCTTTTGTAGGTTCTTCAGCGAAATTAAGCGGCTATGGAATATCGAGATTTTGCGGGA 837679
837680GTTTCAATTCTTTTGTAGGTTCTTCCATGTTTTGGAGGGAGGAGGCGGAGGACGTCACTGTGATTTT 837746
837747GTTTCAATTCTTTTGTAGGTTCTTCCGAGGCCATCTACCACCTCGACAGGGAGTACAGCGGCTGGGT 837813
837814GTTTCAATTCTTTTGTAGGTTCTTCGCTACTAACGATTTGAAAGTCAGTGTGAAAAACGCTATTAG 837879
837880GTTTCAATTCTTTTGTAGGTTCTTCTGGATCAGGTTGTGGGCTGACGGAGGCTGGGAAGTTGTCGA 837945
837946GTTTCAATTCTTTTGTAGGTTCTTCGGGACCTGCCTGCGGCCTTTCACAACGGCCTCTATCA 838007
838008GTTTCAATTCTTTTGTAGGTTCTTCGACCAGGCGACGTGGCCTTGGTGGTCAGGTTGAGGACAAGGCCCAG 838078
838079GTTTCAATTCTTTTGTAGGTTCTTCGCGCTCGCAATCATGGAGGAGGCAGCGTCAGTAGAGGTTAG 838144
838145GTTTCAATTCTTTTGTAGGTTCTTCTTCGGAGACCTTCGCCCAGGCCCTCGCCTACTGGATCCA 838208
838209GTTTCAATTCTTTTGTAGGTTCTTCTTCGGAGACCTTCGCCCAGGCCCTCGCCTACTGGATCCA 838272
838273GTTTCAATTCTTTTGTAGGTTCTTCGAGGCTCAATATCCGCGGCTCTGATATGAGCTATGTTATGAATGTG 838343
838344GTTTCAATTCTTTTGTAGGTTCTTCTGAACCGTATGGGCATCTATACGCTGTGCGTAAGTCGTA 838407
838408GTTTCAATTCTTTTGTAGGTTCTTCAAGAAGATTATCTACTGCGCAGAGCATGAACGTGAAAAAGA 838473
838474GTTTCAATTCTTTTGTAGGTTCTTCTGTTATGGACATGGCAATAAGGGTTAAAGAAGTCGGCGA 838537
838538GTTTCAATTCTTTTGTAGGTTCTTCACAGGCTGACAAGCGTACACAGAGGCAGGAGAAAAGAGCCGA 838604
838605GTTTCAATTCTTTTGTAGGTTCTTCCAGACAAGTCGACAGCATCAAGACCGTCGTCGAGATAGTAG 838670
838671GTTTCAATTCTTTTGTAGGTTCTTCGTTGGGTGATATTCCTGGGTGGCACGTGGTGCGTATCACTCA 838737
838738GTTTCAATTCTTTTGTAGGTTCTTCAGGCTATGGGGAGGGCGCTAGCCCTGCTGATAGCCACACTCGCG 838806
838807GTTTCAATTCTTTTGTAGGTTCTTCCTAGCGTTATTCTCTCACCTTTTAGATACGATCCGAAAT 838870
838871GTTTCAATTCTTTTGTAGGTTCTTCTATGTAAAGTTTCTTCTGGATACTTTTCATAACGTAAAACCAA 838938
838939GTTTCAATTCTTTTGTAGGTTCTTCGGCGGGCAGTGCCGGCGGCCAGGCCGTTATAATAAG 838999
839000GTTTCAATTCTTTTGTAGGTTCTTCATATTCGCCGCGGCGTGGTCCTCCGTGTCGAGGATAAACTTT 839066
839067GTTTCAATTCTTTTGTAGGTTCTTCCGTGCCGAGGTTCAACGCACCGTCGGCGCTGGGCAAC 839128
839129GTTTCAATTCTTTTGTAGGTTCTTC839153
Left flanking sequence : Till position 837468 (length bp)
AGCGACAGACACATAGCACACGCCGCCAACCCCCTCCGCCAGGCAAAGCTCCCGCAGTCAACCACCAGCC
CCCTCAACATTAAAGAGGCCGTTCATCCAA
Right flanking sequence : From position 839153 (length bp)
TGTGGGTTTTTATTTGGGATTTTGGTTTTTGCTCTTTTATAAATGTTTCGTGTGCCGTCGAGACTTTTAC
ACGGCGCGGTTTAGGCCAAGGCGGGCACCA
Print the CRISPR sequence : From position bp To position bp