CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_017034_1
Flanking alignement tool
Page manual
  
Home Page
NC_017034_1                                                                                                                 
top
Strain :
Methanocella sp. HZ254
RefSeq :
NC_017034 (chromosome circular)
CRISPR id :
NC_017034_1
DR consensus (37 bp) :
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
Number of repetitions :
82
Begin Position :
1139126
End Position :
1145088
1139126
TTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CGGCTCTCAGAAACCTAAAACTAATCGGTTACAG
1139196
1139197
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TTCCCAGACCAGCAAGCCCAATGTGGTGTCCCCGC
1139268
1139269
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TGGCAGGCCGAGCTGGTAGTGGAGGGCAGGTATACCCT
1139343
1139344
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TCTCACCCGCTCGTAGACCCCAAGTGGGTTGAGCTG
1139416
1139417
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CGGCTGGAAAACGTGAGCAAGAACATCCTCCCAGAGGT
1139491
1139492
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TACTACCTCCTCGCAGAACACGTAGAACCGGTCAG
1139563
1139564
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TCAATTTGGGATTATTATGAGTGATAAGGATATG
1139634
1139635
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TCATTCTTATACCCGACCACAAATTCCAAGACGTGT
1139707
1139708
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GGAAGGATGATACGGGGGGTAGTGGGAAGGGTGAGAA
1139781
1139782
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GTTATAAAAAAACTCCATGGAAAATTCCCTGGCCAG
1139854
1139855
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
ATTCAAATAGACTCTTATTTCCTCAAGTTTTTTTTG
1139927
1139928
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GAAGGCAAGAACATGATATGGTCAACAATACATTGGTC
1140002
1140003
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CGATAGGCCCGGACAGGGCCGCCATGCTACTTATAA
1140075
1140076
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CGATATGCCCGGACAGGGCCGCCATGCTACTTATAA
1140148
1140149
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
ATAGCCAATAAATTTGGTTCTAACAAACAAAAACCCA
1140222
1140223
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
AACAGTATCAGGGGCATCATCAGGCGCATGTTGATGCG
1140297
1140298
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
AAATAATAAAAAAATAGAACAAGAAACCCAAGAAC
1140369
1140370
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TACAATATTCGACCATCCTCCCCAATGGGGCTGCGT
1140442
1140443
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CACCATCCTGTTTATATTTATAGTGAGGGATAAATA
1140515
1140516
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CCGAACACGCCAGCCAGATTGACGGGTAGCAAAGA
1140587
1140588
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
AAGGACTTTCTAACTTCTCTAAAAATCGCCTTACGT
1140660
1140661
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TTTGGACAACGCCGCCACAAGTGTTGAAATGTTGAA
1140733
1140734
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CATCCTAACTTTTGACGAGTTAGTAAAAACCTATAA
1140806
1140807
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
ACCTAATCAACGGCATCCAAATCCACCACCAAAGGCA
1140880
1140881
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
AACAGCCAGATAGAATGGAGTCTAATGATGGTGTTAAA
1140955
1140956
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CGGTTATGCCCTCAAGTATTTTACCGATATCGT
1141025
1141026
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TTTGCAGATTCATATATCCGGTTTTATTCACGATT
1141097
1141098
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
ACCCAAACAAGGAGGGAATATAAATATGGCAACTTT
1141170
1141171
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GTGGCGCCCATCCTCTGTTCCATGTACTGTTTAAATC
1141244
1141245
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CCCTATTGTTAGCAATTATTTAACATTTGCTAACAA
1141317
1141318
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
ATACGCGTCCAAATCGAGATGAGCCGCGCACTAAA
1141389
1141390
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TGCCCTGGAGGGTTGACGGGTACCGCGTCTACCGGG
1141462
1141463
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CAGTGGGGAGCCTATACGTTATGACGCCTAATGGGT
1141535
1141536
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TGGTAATGACGTCTAGCGGCGAAGGCACGATCCGAAT
1141609
1141610
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CAGACTGGCGAGCGCGTCGGCTACTGGGACGCCCGT
1141682
1141683
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TGTGGTAGTAGTGTTGTAGGCGAGACGTGGGTGGT
1141754
1141755
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TTTGTTATCTTGTTCGGCTTCGGGGTTGTGGTCACGA
1141828
1141829
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GGATGGTCCTCGTGCCAGGTGGATACGCAACCCTCAC
1141902
1141903
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
ACCGTCAGGATAGGCTATACATGCCCGTCAGACCGG
1141975
1141976
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GCTGTTCCAAGGCTCTCGCCTTAGGGTGCTCGTGTA
1142048
1142049
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TAAGAAGTATGGTTACACTATTGTTAAGCATGTTGT
1142121
1142122
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GTCAAAGTATATTTTAGCCAAGACCCCGCTGACATTA
1142195
1142196
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
ACAATTAAAACCGCCTTTACGTGAGGCGAAAAGGAG
1142268
1142269
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
AACACGGTGACCATCCACCATTTATATATTATCAAAA
1142342
1142343
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GTATTGGGGATGCTTTCAATGGCGTAGTAATTTATAT
1142416
1142417
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
ATAGAAGAATAGGATATGGTCATAATATGGCGAAAA
1142489
1142490
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
ACAAAAGTATGCCCAATACATAAAAAAGGTTAGTAC
1142562
1142563
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TAGTTCGTGGTAGTATCCTAGTATCCCCCACAACGT
1142635
1142636
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CTCACCTGTATGATGGCGTGGCGGGGCGCGTAACCCT
1142709
1142710
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CAAAATACTGCGCGGAAACAATGATAGAAAAAATAAA
1142783
1142784
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TGCTTATATAAACGAGGCCTCGGAGCTCACGTGGCA
1142856
1142857
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GGGCCTCACACCATTACTAGTAATCCACCGGAACAAT
1142930
1142931
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GGGCCTCACACCATTACTGGTAATCCACCGGAACAAT
1143004
1143005
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
ATTGGGAGGCGCGGAGTACCAGCCCAGCCATACAT
1143076
1143077
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GCTGTGCATGCCGCCCCACCCGGGCAACGCCGACAACT
1143151
1143152
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GAGGAAGACGGGGTGCCCTCACCACAAGACGAGGA
1143223
1143224
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TGGTTCACGGGGGTGCCCGGGCTTGACGTGCTAAC
1143295
1143296
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TGGTTCACGGGGGTGCCCGGGTTTGACGTGCTAAC
1143367
1143368
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GGGTTCAACGCCCACTTATACTCCCACATATACGC
1143439
1143440
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GGGTTCAACGCCCACTTATACTCCCACATATACGC
1143511
1143512
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CGTGCCGTCGACGCTTCCCTGGAACGCCAGGTTCGC
1143584
1143585
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
TTGTCGGCTCGTGGTCTAATGGGTTGTCCGGCCAGT
1143657
1143658
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CACTGGTACGAACTCGACGCCGGGCGGCGAATTCG
1143729
1143730
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CCTCTGTGAGCGCATAAAAAAACTGCTTGTTGATAA
1143802
1143803
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GGCACGAACTACTATGACGTGTACATGGATGGTAGC
1143875
1143876
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GTAGCTGTACACACCGCCACTGGGGTGGCGGCTGCAAG
1143950
1143951
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CCTCGAAACGGGCGTCGAATCAGCCCACACGGAGCT
1144023
1144024
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CAACGAGGAGGCGAGGATATGACTGACAATGGTCTCCA
1144098
1144099
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GCCCTTCAACGGCTCATAGGCTGTGTTGCTCATGTTA
1144172
1144173
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
AGGGAGTTGAACGACCTGGCCCAGAAGCAGGAGAAGA
1144246
1144247
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GGGGGCCACGCCCTCATGATAATCGGCTACGATGACA
1144320
1144321
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
ACCCCTACACGGCGGACGACTACAACACGGTTAGGA
1144393
1144394
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GCCCCACAACGGGTACATCACCTTCGACGTGGACGG
1144466
1144467
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CCTCGAAGCGGCGAAAGAACGTATTTCATGGGAATT
1144539
1144540
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CCTCGAAGCGGCGAAAGAACGTATTTCATGGGCATT
1144612
1144613
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CATCTGGTCGACGAGATACAAGATGGGCATATCGT
1144684
1144685
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GGGGTCATCTGGGACGCCCAGGGGCGTACCCAGGA
1144756
1144757
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CCGCATGACAGGTTCTCCATCCATGGTCTCCCCCGTC
1144830
1144831
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GGTTGGTGAAAATATGCAAATGACAGAGAATATGAC
1144903
1144904
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
CAGGGAGGAATCCCTGTCCAGGTATAGTACGAAGCTCA
1144978
1144979
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
GGTGAGGAACGCTGCGAACACGATACTAGGCGTCAT
1145051
1145052
CTTTCAATCCTCATTTTGCGAGGACACATTTTGAAAC
1145088
Left flanking sequence : Till position 1139126 (length
bp)
AGACTATTTCACTTTTTGGGGTCTTAGATGTAATTGACTAGTATGCCAAGAATGTATTCAAATTCATTAA
TCCTTTTAAGATATGATGATAAGTTGAATA
Right flanking sequence : From position 1145088 (length
bp)
CGCCAAAAAAACATAGCTTTCCTGACCAATAAACCTTTGTATAACCCCCTTCAATTCACTCATTTGTGAA
GGTTAAAAAATCGTATATCCATTTATTAAG
Print the CRISPR sequence : From position
bp To position
bp