Institut de Génétique et Microbiologie

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NC_017079_8                                                                                                                 top


Strain : Caldilinea aerophila DSM 14535 = NBRC 104270 RefSeq :NC_017079 (chromosome circular)
CRISPR id : NC_017079_8
DR consensus (37 bp) : GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGNumber of repetitions :81
Begin Position : 2013095 End Position : 2018981

2013095GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGAGCACGAGAGAGAAACACGTGGTTCTGGGTATTTTATC 2013169
2013170GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGAACTACATCTGGCCTTTCCAGATAAATTTCTAACAAC 2013243
2013244GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGAGTTACCGTTACCGGGCGAATACCGCAGGCGGGCTG 2013316
2013317GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGCTATAGTTGGCTGCGCAGGACGATATTCGCACAA 2013388
2013389GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGACTACACCCTGTCCGGCTTCGAGCGCATCGCCGGC 2013460
2013461GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTCTGCAGCGGCAAGCTGTGGGGGGAAAGAGTAAAT 2013532
2013533GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCAATTCCGAACTTCTCCTCACTTGCATACAAACACG 2013605
2013606GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGATTCAAACACCGCCATGTTTGGCGCAGAAGGCAAAT 2013679
2013680GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTGGAGGCCAGTCGGCGTATGGGCGACGGGCTGGACA 2013752
2013753GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCGCTTTAGTCTCCGACGGTGGGCTCTGGACGTTC 2013823
2013824GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTTTCTGTATTGTGTTGTTTTTCTCTTCTTTGTATCTG 2013897
2013898GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCTGCGGTCTCCATGTCGATTGCGACCTGTGCGCT 2013968
2013969GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCTCCTGTGACCAATACGACAAACGCGGCGGCTGCCGCC 2014043
2014044GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCTGTTCCCGCTGTTGCAGCAAGCACAGCCTGCACAA 2014116
2014117GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGTGCGATCAGCACCGTGCGCCTGTTCGTGGATGGCGTG 2014191
2014192GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGAACGACCGGTATGCGCATTACCGATGCGGGCGAAG 2014263
2014264GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGAAATCATTGCCGGTGCGTGCAGTATAGATGCGCACCGT 2014338
2014339GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGGCCTGTGGCATCGGCGCACCGGTGCTGCGAACAA 2014410
2014411GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGTTCAATCTTACTGACCTCTACTGCTCTTATGGCAG 2014483
2014484GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTCGTTTTCCGGTTCTCTGACCTTCTCTGTCTCACCGT 2014557
2014558GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGGGCCTGGGGCACGGTGACAAACTATGCCGATGGT 2014629
2014630GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGATTAACGCCTTGAAAGCGTAATATGAAAACATGTT 2014702
2014703GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGGTACCGTAGCGACGGTATTCTTGAGGCTCTCAAA 2014774
2014775GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGATTAATATTCAATCTATGACGACACAACAGCTTGCC 2014847
2014848GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCACGCAATTTCATCATTCGCCAAAAGGCGAATAGGAA 2014921
2014922GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCGTCCTTGGCACGCTCGGCTGGCGTGCCGAGGCAGC 2014994
2014995GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGTAATCACAGAAGAAGGTGCGGCAAAGCAAATTCTC 2015067
2015068GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGATCTAACAGCCGATGACGCTGTTAAAAGTGTAGGC 2015139
2015140GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGTTTACTGTAACACCGTTGTCCAGTAAATACCAGA 2015211
2015212GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCCCAATCCAGAGACTCATCGATCAATGCCTAGCCTA 2015284
2015285GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCCGCTTGTGTAGTTGTCCGCATCCGCCGTGCAAAT 2015356
2015357GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGAAATTACAAGAGAATCCACGATAGACTTGATCGGCGCA 2015431
2015432GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGAGCAGAAACACGCAGTTTTCTGCTACATTGCGGCGA 2015504
2015505GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCTATAGTAATCTATCATAGCTTGTCTAACTACTGCAAT 2015579
2015580GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTGGCTGGACGGCGCCGGAGGCGCTATCGACGGAAC 2015651
2015652GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGGCCCGTAGGGGATATAACGAACAAGACCATCGAGC 2015724
2015725GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGAATTATCAAGGTGCTGAAAACATTTTCCTGTGTCC 2015797
2015798GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGAATATACCGTGGCGGTGCCGATGCGGATTTTCTGC 2015869
2015870GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTTGATACTGGTAATCGACAGCGTGGTCGCTGCGCC 2015941
2015942GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCTGTGGCGGCGCTTCCCGTTTCCGGCTGACCCGCA 2016013
2016014GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGAGCCAGTGGCGAGCGTGATGGTTGTCCACGCCGAG 2016085
2016086GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTGTTGTTTGCACCGTCATAGAGCGCCAGCGGCACATT 2016159
2016160GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCACAGACTCCCTCGCTGTGCCGGATGCTCAATTCC 2016231
2016232GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCTGCGTTATGCTGCATCGCTACGACGCAACGACGCCA 2016305
2016306GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGGTCGCGGTCAGTGCCACTGAACACCGCAACGACTTGA 2016380
2016381GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGTTTGCAAGCAGACTTGAACGATGCATTGCTACGGTG 2016454
2016455GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCATAATCATCCTTCCGTAATCTGTCGCAAATCCCATG 2016528
2016529GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTGCCGTTTGCCAAATTGACTGCATCGGCGTCAACAG 2016601
2016602GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCCCAATTTATATCGGTTAAGGCGTTGATAATAGCGTT 2016675
2016676GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGACATCCTGCATTCCGGTCGAGCTCAAATCGTAAAAA 2016748
2016749GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGTTTTCCAGGGCAAAACAAAACGCCGATGCGCGCTCA 2016822
2016823GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGAAAGGTCTCAGAACGTGTCGGTTCAAAGTAAGCTGAG 2016896
2016897GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGACCGGAACTAAGCGCAGTGCTGCCTGCGCCTTGACCA 2016970
2016971GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGACGCCGTTGCGATAGTCAAGCATCGCTTGCTTGACTA 2017044
2017045GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGAAAAAACAACCGGTGAGCAATTCAGCCCACCAGTCA 2017117
2017118GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCTGCTCCGGCGTGAGCTGCTGGAACAGTTCAAGTT 2017189
2017190GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTGAGGTAAAAGAAATCTCCCCAAGGCGTCTTCGTCT 2017262
2017263GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGTAAATCCGCATACACGTCTGGCAAGTGCGCTTCAA 2017335
2017336GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGATTGCAAGCACATCATGGCAATGGGCACTTCGCACG 2017408
2017409GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCTCGGTCGAGCGGCCCTTCCAACACATCCAGAATGC 2017481
2017482GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGATTGCAAGCACATCATGGCAATGGGCACTTCGCACG 2017554
2017555GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGATCTAGCAGGTTGTCGGCAGCGTCGGCACTTCGCT 2017626
2017627GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCTTCCACATCGCCCCACCATATTTTGCGCCCGTCTG 2017699
2017700GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGACGGTTCCGCTGGCACGAGTGCCCAACAACGGCATA 2017772
2017773GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGGCCTTTGGACTGCTATCCAGCGCTGGCCTGATAG 2017844
2017845GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTTGTTAGCTCCGTACTCAAACACGGTGCCGACTAA 2017916
2017917GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTTGGGAAAGAACAAATCACTATCGAGAATCAACGGA 2017989
2017990GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGTGCGGAAGTAAGGCAACCGCGTACACAGGCGCACTC 2018063
2018064GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCGGCGCTATACGACACACTGCGGCGATTGCGACGCT 2018136
2018137GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTCGCTACAACGACGCCGCTGCGGCGTTACTGCAAC 2018208
2018209GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGTACAGTGTCACTTTTACGGGTTTGCCTGTGGGCACTT 2018282
2018283GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCTTCGACGGAGAGGAAGGAATGGGAGTGCATCTTGT 2018355
2018356GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGATGCGTCGGCAGCAACGCCGGGAAGCTTCCGCCACA 2018428
2018429GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGAGGTGGCTTACAAGCTCTGGCGCTCCGGCGTCGATATG 2018503
2018504GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCGAAGAAAAAGTTCTGCGTCTCTTCGTTCGTGACCA 2018576
2018577GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGACCAGTCGACACGCTTGCGGCGACTGGGATGATTGC 2018649
2018650GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCTAAAATCAAATGCATCTTCGCCAAGCTTGTTGCAA 2018722
2018723GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGCTGGTCAAGGACGTCGCACTGGCGCTGGCGGAATT 2018795
2018796GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGGGAAACTCGCGCGCCTGCCGGTTCCATTTCAGTCAGG 2018869
2018870GTCTGAAGAAACGATCCAACAGCGAGGATACTGAAAGCAACCGGGAATTGTACGACGTGCTCAACACGGCAATGG 2018944
2018945GTTTGAAGAAACGATCCAACAGCGAGGATACTAACCT2018981
Left flanking sequence : Till position 2013095 (length bp)
AAGGTGCGAGAACCTTTCACCAAAACCGATCCAGTGGTCTTACACCGTCCAAAAATTGGAAACTAAACTC
GGAACGATCTTATGAAAAGCTGTACTAAGT
Right flanking sequence : From position 2018981 (length bp)
GAAAATCAGGGGCGGGAGTGGAGGACGACCCGCTGCGGGACGGCGGGTAGGGCATCTGGGGCGAGTGGAG
GGGCGGTCCGGGGCCGTTTGGGGGCGAGAT
Print the CRISPR sequence : From position bp To position bp