Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017160_3                                                                                                                 top


Strain : Yersinia pestis D182038 RefSeq :NC_017160 (chromosome circular)
CRISPR id : NC_017160_3
DR consensus (28 bp) : GTTCACTGCCGCACAGGCAGCTTAGAAANumber of repetitions :8
Begin Position : 2839776 End Position : 2840223

2839776GTTCACTGCCGCACAGGCAGCTTAGAAAGTCAGGAATTTATTCAACGTGTTGCAGACTCA 2839835
2839836GTTCACTGCCGCACAGGCAGCTTAGAAACTGATGGGTAACTTTAATCCCAAATTCTTTTT 2839895
2839896GTTCACTGCCGCACAGGCAGCTTAGAAATGTTAAATCGTCGCCTAAATTTGTTTGACCGA 2839955
2839956GTTCACTGCCGCACAGGCAGCTTAGAAAGTGGAATGGCTATTGCTATCGCTCGAGAATAT 2840015
2840016GTTCACTGCCGCACAGGCAGCTTAGAAAATCTGCGCCAAAGAAAATGCCATTCAGATAAT 2840075
2840076GTTCACTGCTGCACAGGCAGCTTAGAAAAACTACTAGAAGCTTGCCCATCTTACCTTTTC 2840135
2840136GTTCACTGCCGCACAGGCAGCTTAGAAAATCATGAAAGACATTGTTCGCCAGTCCCCTGA 2840195
2840196GTTCACTGCCGCACAGGCAATAATCAAA2840223
Left flanking sequence : Till position 2839776 (length bp)
TTGATTTTACATTGTGGTTATCGGTGGTCTAAAAAAAGGGTTTTTTCCCCATTAGCGAAATAAGTATTTT
ACAAACAGGATGTTATCGTATTATCTTACT
Right flanking sequence : From position 2840223 (length bp)
TCCTGGGCCATGTGCTGATGCTATTTGGGGAGCAAAATTGCGAGCGGAAGCGCATTTTGTAACTGACAAC
AGGGAGAATGGCATCTTTTATTACTGACTT
Print the CRISPR sequence : From position bp To position bp