CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_017173_14
Flanking alignement tool
Page manual
  
Home Page
NC_017173_14                                                                                                                 
top
Strain :
Clostridium difficile CF5
RefSeq :
NC_017173 (chromosome circular)
CRISPR id :
NC_017173_14
DR consensus (26 bp) :
TTTCTTTTACAGCTTCTAAACATATA
Number of repetitions :
4
Begin Position :
3092758
End Position :
3093000
3092758
TTTGATTAACTGCTTCTAAACAAATC
TCTTCTGTTTGTTCCTTTACATAAGCTAAAGCATTATAGT
3092823
3092824
TTTCTCTTACTGCCTCTAAGCACATT
AATTCTGTCTGACTTTCTACATATTTAAGAATTTTTCCAT
3092889
3092890
TTTGCCTTACTGCTTCTATAAATATT
CTTTCTGTTGGTACCTTTACATAACTTAATATTTCTTTTATTTCAAGTTCTTCAAATG
3092973
3092974
AACCTCTTACTGCTTCTATACATATA
3092999
Left flanking sequence : Till position 3092758 (length
bp)
GTTTGATTATTTATATATTTCAACATTCTATAATCTTGTTTTACTACTTTTAGACAAACTTCTTCTGTTT
GTTCTTTCACATATTTAAGCGCTTCATAAC
Right flanking sequence : From position 3093000 (length
bp)
CTTCAGTCTGTTTTTTTACGTATTGCAATACTTTTCCATTTTGTCTAACTGACTCCAAGCAAATTTCTTC
TGTTTGCTCTTTTACGTACTGTAGTGCTCT
Print the CRISPR sequence : From position
bp To position
bp