CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_017173_5
Flanking alignement tool
Page manual
  
Home Page
NC_017173_5                                                                                                                 
top
Strain :
Clostridium difficile CF5
RefSeq :
NC_017173 (chromosome circular)
CRISPR id :
NC_017173_5
DR consensus (30 bp) :
GTTTTATATTAACTAAGTGGTATGTAAATA
Number of repetitions :
4
Begin Position :
1540073
End Position :
1540300
1540073
GTTTTATATTAACTAAGTGGTATGTAAATA
AAGTTAAATTTATTACATCTAATTCTGTCTCTTCAT
1540138
1540139
GTTTTATATTAACTAAGTGGTATGTAAATA
CAACAGCACCATAAAAAAAACCATTCCTAAAAAACT
1540204
1540205
GTTTTATATTAACTAAGTGGTATGTAAATA
GTATAATGTTGAAAAGTTAGAGAGTACAATCAAGAA
1540270
1540271
GTTTTACATTAACTAAAATGTATAGAATAA
1540300
Left flanking sequence : Till position 1540073 (length
bp)
GGTATATGATAAACTTTATCATTTGCACTACTCATGGTTCACTGCAAATTTAAGAGAGTTGCACATGTGT
AAGTATTGAAAATGCCCAGTTTATTTTGGG
Right flanking sequence : From position 1540300 (length
bp)
AACATGTATTTATACTTAAATTCTGTACCTATATAAAAAAGTGAACTCTGTCAACAAAGCACTTTTTTAT
ATAGATGAATTATCATTTTGTTTTAAGATA
Print the CRISPR sequence : From position
bp To position
bp