CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_017273_3
Flanking alignement tool
Page manual
  
Home Page
NC_017273_3                                                                                                                 
top
Strain :
Thermus thermophilus SG0.5JP17-16
RefSeq :
NC_017273 (plasmid pTHTHE1601 c)
CRISPR id :
NC_017273_3
DR consensus (36 bp) :
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
Number of repetitions :
7
Begin Position :
116844
End Position :
117310
116844
GTATCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
CCTCTCTGCCGCGAGCATCCTTCACCTCCAAAGGAA
116915
116916
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
ACCTCCAAAAACCTGCAGAGGAAAGAGCCTCACCAG
116987
116988
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
CTACACGAAGCTCTGGAACAGGGGGGGCGGTAAGCT
117059
117060
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
GGGTCTCGTCCTTCCCGTCCTTCCTAGGCATACTC
117130
117131
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
GGACCTCGCCATTTCCACCAGGGAGGACGCGGACTA
117202
117203
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
TATCACCGACGCCGCCATCGTACAAACCGGGAGTAG
117274
117275
GTTTCAATCCTCTACGAGGCTAACGAGGTTTGCAAC
117310
Left flanking sequence : Till position 116844 (length
bp)
TGGTGGCCGTGGCCCACAAGCTCCTCAGGCGGATGATGGGCAGGCTCAGGGAGTACTACGCAACCCAGCC
ATACCAAGAGGTCGCTTGACAGGCAAGACA
Right flanking sequence : From position 117310 (length
bp)
GGCCCCCTCCAGGAAGCGGCTCCAGGCGGGGGGTCTTGAGGCCATTTTCGCACGCGGGGGGATTATGCGT
CAACCTGGAAGAGAAGCCGTGGGACTAAAG
Print the CRISPR sequence : From position
bp To position
bp