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CRISPRs details
NC_017273_6
Flanking alignement tool
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NC_017273_6                                                                                                                 
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Strain :
Thermus thermophilus SG0.5JP17-16
RefSeq :
NC_017273 (plasmid pTHTHE1601 c)
CRISPR id :
NC_017273_6
DR consensus (37 bp) :
GTTTCAATCCTCACCGGCCCTTTCGGGCCGGTGCAAC
Number of repetitions :
7
Begin Position :
172053
End Position :
172528
172053
GTTTGTTTCCTTACCGGCCCTTTCGGGCCGGTGCAAC
ATAAGCGCCGCCGCGTAGAAGCCCAGCTTGGTC
172122
172123
GTTTCAATCCTCACCGGCCCTTTCGGGCCGGTGCAAC
AGGGCCCGGGCGGGGGTGGGGGGACGCCCCCCGTGGAG
172197
172198
GTTTCAATCCTCACCGGCCCTTTCGGGCCGGTGCAAC
GCGTTGGGGATGCCGCTTTCCCTTGCCCAAGCCGT
172269
172270
GTTTCAATCCTCACCGGCCCTTTCGGGCCGGTGCAAC
AAGTGTGGGGGCTGGCGGGGTGGGGGTTGGGGGCGGT
172343
172344
GTTTCAATCCTCACCGGCCCTTTCGGGCCGGTGCAAC
ATGATCTCAGGCAGCTACAGCGTCATCGCTAATGTCAAC
172419
172420
GTTTCAATCCTCACCGGCCCTTTCGGGCCGGTGCAAC
TCGCACGGCGCGGTAGAGCGCAGGATTTTCACCAG
172491
172492
GTTTCAATCCTCACCGGCCCTTTCGGGCCGGTGCAAC
172528
Left flanking sequence : Till position 172053 (length
bp)
ACCGGGTGGTGGCCGCCCCGTGGTGGGCGGTGGCCTGAGGGGGCTTTCCACCCAGGTCCATCCCCACGTG
CGTGGGGACTACACATGACCAGGACGGCAA
Right flanking sequence : From position 172528 (length
bp)
TCCCCCCTATATCGTAGCCCTCCTGATGGGCAGGAAGGAGATCCTTCGCGGCGACCCCCTTCTCGGGACC
CTTGCTCAGGGGTTTGGCGCGGGGTACCCG
Print the CRISPR sequence : From position
bp To position
bp