CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_017276_2
Flanking alignement tool
Page manual
  
Home Page
NC_017276_2                                                                                                                 
top
Strain :
Sulfolobus islandicus REY15A
RefSeq :
NC_017276 (chromosome circular)
CRISPR id :
NC_017276_2
DR consensus (24 bp) :
CTTTCAATTCTATAGTAGATTAGC
Number of repetitions :
115
Begin Position :
725209
End Position :
732590
725209
CTTTCAATTCTATAGTAGATTAGC
CAGCTGTTTCAGATCATAAGTAATTTGTGCTATTATATAGTC
725274
725275
CTTTCAATTCTATAGTAGATTAGC
TTAGAATGAAAATTGTCTCATTGCCTCTTCTTTAACTTTGTC
725340
725341
CTTTCAATTCTATAGTAGATTAGC
AGGGTTCGATTTGACTTATGCCCCTAGTGACTCGATGGCA
725404
725405
CTTTCAATTCTATAGTAGATTAGC
ACGCGGTGAACTTTCTGTCTTTCAGGAATTCGGAAATCTCT
725469
725470
CTTTCAATTCTATAGTAGATTAGC
GAGAGATGTACAAAATCAGAAGGACAGACCCTGGAAGAA
725532
725533
CTTTCAATTCTATAGTAGATTAGC
GCGTAGTTGAGGAGTTTTTTCCTAATTTTTGCCATAAGAACTTT
725600
725601
CTTTCAATTCTATAGTAGATTAGC
CGGCAATGAGTTTTGGGTAAATGTGGTGGAAATTGATA
725662
725663
CTTTCAATTCTATAGTAGATTAGC
CTGGGACACTGAAAGAGAGTTAGTGAGTCTGCACTTTA
725724
725725
CTTTCAATTCTATAGTAGATTAGC
AAGGAGTCACTGATTGGATTATTCGTATTTAGTAAAAAGAA
725789
725790
CTTTCAATTCTATAGTAGATTAGC
TAGGGGCTTCAAACGAACTACCGACTGAAGAAGAATTAC
725852
725853
CTTTCAATTCTATAGTAGATTAGC
ATAAACTTTATATACCACCAAACAAACAATATATTGTAGAT
725917
725918
CTTTCAATTCTATAGTAGATTAGC
CGGATATACAAAGCAGAACTAGGAAAGATCTAATTCATTATAGT
725985
725986
CTTTCAATTCTATAGTAGATTAGC
CACGCCCGATATGTCTATACCTGTAACTTCTTTGGAAAAACTG
726052
726053
CTTTCAATTCTATAGTAGATTAGC
TTACTTAACTAAAGTTCTGAGCCAAGTCTTAAACCTAGA
726115
726116
CTTTCAATTCTATAGTAGATTAGC
TGAATTTCTTACAAACATATAAATTGTAATTGATGAATTTG
726180
726181
CTTTCAATTCTATAGTAGATTAGC
TAGTAAAAACGTACTATTTTTTTGATTCGCAAGATGATACTCT
726247
726248
CTTTCAATTCTATAGTAGATTAGC
ATGGCATACTACGACGTCAGTAGGGAACTAGAGATTTACAT
726312
726313
CTTTCAATTCTATAGTAGATTAGC
CTAACATGGTAGCTTTCATGGCAGGCGACGTCACTAGTGT
726376
726377
CTTTCAATTCTATAGTAGATTAGC
TAGTAAAAACGTACTATTTTTTTGATTCGCAAGATGATACTCT
726443
726444
CTTTCAATTCTATAGTAGATTAGC
ATGGCATACTACGACGTCAGTAGGGAACTAGAGATTTACAT
726508
726509
CTTTCAATTCTATAGTAGATTAGC
CTAACATGGTAGCTTTCATGGCAGGCGACGTCACTAGTGT
726572
726573
CTTTCAATTCTATAGTAGATTAGC
AAAAATTCGCTACTACAAATCTTAGTTAAGTCCTGTTG
726634
726635
CTTTCAATTCTATAGTAGATTAGC
CATCACTCGTAGCTATATACCTTGGGACAAGGACTCTGG
726697
726698
CTTTCAATTCTATAGTAGATTAGC
AATTGCCTAAACTTTTCGCCGCTTATCTCTTCTTAAATA
726760
726761
CTTTCAATTCTATAGTAGATTAGC
CAAATTTCTGGCCGGGGGGCCAGAATATCGGTAATCGAT
726823
726824
CTTTCAATTCTATAGTAGATTAGC
GATATTGTTAATAGAGTTGTAATTGAAGTAATTGGAAAGGA
726888
726889
CTTTCAATTCTATAGTAGATTAGC
TAGGCGTCGCAAAGTTCTTCCGTGACATTGCAGACTGGA
726951
726952
CTTTCAATTCTATAGTAGATTAGC
TGAATGGTGCGATAAATATCCTACATATCCCCGAGTCTCT
727015
727016
CTTTCAATTCTATAGTAGATTAGC
ATGATAATAGAGAGAATAAAGAGAGAAACTGGGGAGTTAAA
727080
727081
CTTTCAATTCTATAGTAGATTAGC
CGTGTCAATATCGATTGGGAAGACTTCAAGAAGGATCAAG
727144
727145
CTTTCAATTCTATAGTAGATTAGC
AATAATCGCTCGCCTTCTTAGCCTCTGCAATTATCTGCGA
727208
727209
CTTTCAATTCTATAGTAGATTAGC
TTTATTAGCCCGCGAGGGCTTTACAATTAAAGAAATAGCGTT
727274
727275
CTTTCAATTCTATAGTAGATTAGC
CCATAGAACTAAACGGAAAAATTGTCACTGTTGAGGGTGA
727338
727339
CTTTCAATTCTATAGTAGATTAGC
AGAAAGGGTAGGGAGACTAATAAAAATGCTTCCCAGTAT
727401
727402
CTTTCAATTCTATAGTAGATTAGC
CGAGGTCTCTCCTCATCTATACTTTTGATAATTGATATTAGT
727467
727468
CTTTCAATTCTATAGTAGATTAGC
GGTATTAACGGTTGACGATAAACAATTAGAAGACAGAATA
727531
727532
CTTTCAATTCTATAGTAGATTAGC
ACTATTGATTAGATTTTTTGAGTCTGCCCAGAAAGATGAAA
727596
727597
CTTTCAATTCTATAGTAGATTAGC
AGAAAGATCTGAAAGGACCTGAACGAAATTGGGCAGAATTG
727661
727662
CTTTCAATTCTATAGTAGATTAGC
CATTTTTGCTATTTAGCCATCCCAGACCGCGAAGGACTTC
727725
727726
CTTTCAATTCTATAGTAGATTAGC
TAGATGAGATTGTTGACCGTTGGCGGTGGGGAATATACTA
727789
727790
CTTTCAATTCTATAGTAGATTAGC
TAAGTTTAGGGAAAGGTTTAAAAACGCCTAAAAAAGAGAGT
727854
727855
CTTTCAATTCTATAGTAGATTAGC
GATATGAATGGAGAATTACTCCATAATTTGATCCTAAAATCA
727920
727921
CTTTCAATTCTATAGTAGATTAGC
CATTCATGGGGAATTCCTCCATCTTCATCTTCACCACCAC
727984
727985
CTTTCAATTCTATAGTAGATTAGC
GGGTAATAATGGGCATAGGCATAGGGGTTGCTATCGGCTT
728048
728049
CTTTCAATTCTATAGTAGATTAGC
GATAAGCGATAAGCCCCGCGACTGCGAAGATGACAAAGAAGA
728114
728115
CTTTCAATTCTATAGTAGATTAGC
TGGTAGTACAACTGTTACAAATCCTATTGGCAGCTTTAA
728177
728178
CTTTCAATTCTATAGTAGATTAGC
CAGTTGATAAGTATCCATACATTCAAGCACGAGGATG
728238
728239
CTTTCAATTCTATAGTAGATTAGC
CGGTGCTGCGGCCTTCTTCATACTTTTGTTGTTAGCGGTCAC
728304
728305
CTTTCAATTCTATAGTAGATTAGC
AACTTTTATAACTGATGATAATAGAGAATTCGTATTTTGTA
728369
728370
CTTTCAATTCTATAGTAGATTAGC
AGGGAGAGCTGTTAAAGGATCTTCAGCATCTCCGTGAAATAG
728435
728436
CTTTCAATTCTATAGTAGATTAGC
CACCCCAAAACAAATCCAAACCCATGGAAAAGGTAATGAA
728499
728500
CTTTCAATTCTATAGTAGATTAGC
TTGGGAGTATATAGTAGAAATACGGTGCATTGGGTAAAA
728562
728563
CTTTCAATTCTATAGTAGATTAGC
TGAGTTCTTTAACGGATTCATGTGGTGATTAAAAAATA
728624
728625
CTTTCAATTCTATAGTAGATTAGC
ATATAGGTTGCCAAATGATTCTATAACAATTAGTATTCT
728687
728688
CTTTCAATTCTATAGTAGATTAGC
CATTTCTGCTTCTATGCAATAAGACCACTGCTCTGCTTTT
728751
728752
CTTTCAATTCTATAGTAGATTAGC
TTAAAGCACCGTTCAGGTCACTATGAAGCTTGTGTCCTCT
728815
728816
CTTTCAATTCTATAGTAGATTAGC
TGCTACCGTACGGAGTGGCGACCCGTACGGTAAAGAGCG
728878
728879
CTTTCAATTCTATAGTAGATTAGC
ACTTCAATTACGCTTTTGTCGCCATATGTTATCAGTCTT
728941
728942
CTTTCAATTCTATAGTAGATTAGC
CCAGGAATGTAAGAAGATTAGCAATTCGAAAAAAGAATTC
729005
729006
CTTTCAATTCTATAGTAGATTAGC
TTCACTATCAGCTTTATGTGATAATTTCAGTCCGATTTAA
729069
729070
CTTTCAATTCTATAGTAGATTAGC
TTGTCTCACCATCTAATTCTATTGCTTTCTCATAATCAT
729132
729133
CTTTCAATTCTATAGTAGATTAGC
AAAATAAAAATCATTTTACAATCCTTTCTATTTTATCAAGAA
729198
729199
CTTTCAATTCTATAGTAGATTAGC
AAATTAGAGCCATTAGTACGATTAATATTAGACGTAACTGA
729263
729264
CTTTCAATTCTATAGTAGATTAGC
TAATGTGTTAAATCCTCCCTGGATTTACTTTGTACATCTG
729327
729328
CTTTCAATTCTATAGTAGATTAGC
TTGGGTTATGTAAGTCGGGTCGAAGAAGAACAGCATAGAAGTAAT
729396
729397
CTTTCAATTCTATAGTAGATTAGC
AAAGACCTCTTCAGAGTGGCAAATGTACCTATCATTTTGGTA
729462
729463
CTTTCAATTCTATAGTAGATTAGC
ATGAGAACTCTATATTTGACCATCTCCACATAGAATAAAA
729526
729527
CTTTCAATTCTATAGTAGATTAGC
GGTCACGAAAAAATAAGAAAGAAATAGTAGAATTTGAAG
729589
729590
CTTTCAATTCTATAGTAGATTAGC
GGTTTGCAGACCCCGCCACTTACTCTCTGTCTTCTCCTCTA
729654
729655
CTTTCAATTCTATAGTAGATTAGC
CTGGTCTAAATAGTGGATTTTTAGGAGCGAAATCATTAAC
729718
729719
CTTTCAATTCTATAGTAGATTAGC
TTAGTAATTATCACAACAGTAAAGTCAGTGCCGAAGCTTC
729782
729783
CTTTCAATTCTATAGTAGATTAGC
TAAGTCAGAGAATCACAGCGGAACTTTATCAATTATTG
729844
729845
CTTTCAATTCTATAGTAGATTAGC
GGTAATGGAGTCGTAGGCGGATCAGTGCCCACTACAACAATATTT
729913
729914
CTTTCAATTCTATAGTAGATTAGC
ACGCGACGATATGGCAAACTTCTCCGCAACAGACTGCACAAT
729979
729980
CTTTCAATTCTATAGTAGATTAGC
CTGTCAGAAGAGGGATTTATGTTTATGAGCTTACAGAGAAGGGTCGG
730050
730051
CTTTCAATTCTATAGTAGATTAGC
TCAAGGAATTCTACAATGTCATAATTTCTATATTTTTTAT
730114
730115
CTTTCAATTCTATAGTAGATTAGC
CCGGTATTTGGATTTATCGCATACACTAATTGTTCAACC
730177
730178
CTTTCAATTCTATAGTAGATTAGC
AGAGCGATCTATCCAGTAGAGATTAACGAAAAATAATTTTTTTCAT
730247
730248
CTTTCAATTCTATAGTAGATTAGC
CTATACTGTAGGACGTTTTCTGAGTTACACGAGAGCTTTAGA
730313
730314
CTTTCAATTCTATAGTAGATTAGC
GTTGTCATGGATGACGAGCCAAGAAAATGCGATAATAGT
730376
730377
CTTTCAATTCTATAGTAGATTAGC
CACACTCACTTCGTTACGCATTAATTAGCTATTTAGCGAG
730440
730441
CTTTCAATTCTATAGTAGATTAGC
ATAATTTGGTTGCTAACGTTAATCATCAACAAAAGATTGTCAA
730507
730508
CTTTCAATTCTATAGTAGATTAGC
ATCGCAATGCTGGGAATTGGGTGGTGGCTAGGTTCTTCATT
730572
730573
CTTTCAATTCTATAGTAGATTAGC
CTCCATAGGAATTAAATCTAGATTGTCCATGACATTGAT
730635
730636
CTTTCAATTCTATAGTAGATTAGC
ACAATTTCAGCATGCACTGCGGACGCTTATGTTTGTTATTC
730700
730701
CTTTCAATTCTATAGTAGATTAGC
TTTATATACCAATAGAAGAACGTGAACAGATACCGCCAGATG
730766
730767
CTTTCAATTCTATAGTAGATTAGC
TTATAAAGAGAAATTTTTAGGTTAAGGGAGAAAATTA
730827
730828
CTTTCAATTCTATAGTAGATTAGC
CTGATCTTTCTTGAAATCTTCCCAATCAATGTTTACTCTAAT
730893
730894
CTTTCAATTCTATAGTAGATTAGC
CATAAATATGAGTAAGACATTAGAATACATCAAAAAAATGT
730958
730959
CTTTCAATTCTATAGTAGATTAGC
CTGAAACTACTGTCGTTTCTGTCGTTAGCGTCAACTAGAA
731022
731023
CTTTCAATTCTATAGTAGATTAGC
ATACGCCGAATTAGAGCTAATCACTGAGAAATACGGTATATCC
731089
731090
CTTTCAATTCTATAGTAGATTAGC
TTACTCTATAGCTAGTGTCATACTTTAAGGCAAGAAAATC
731153
731154
CTTTCAATTCTATAGTAGATTAGC
TTTTGCATACTCTCCCCCTCTGTCTATTTAATTATTCGTTTG
731219
731220
CTTTCAATTCTATAGTAGATTAGC
ACGTCTATTTCTTCCTACCGGAGCAGATCGATAACTTTA
731282
731283
CTTTCAATTCTATAGTAGATTAGC
CTATTAAAAGCACAAATTCAGGAATATGTTTAAAAATTTG
731346
731347
CTTTCAATTCTATAGTAGATTAGC
AGATGTAGTTAGCCCACCTATTGGTGGAGGATAATTATTTTGTT
731414
731415
CTTTCAATTCTATAGTAGATTAGC
CGGCTGCAAAGTATCATATATTCAGTTTTTCGCACTATTG
731478
731479
CTTTCAATTCTATAGTAGATTAGC
TCAACTTTGTATCGTACCTTAACGGTGTGATTTATATCGC
731542
731543
CTTTCAATTCTATAGTAGATTAGC
TACGTTACAAAAACTGAATAAACACCCCAGTTTACAGAG
731605
731606
CTTTCAATTCTATAGTAGATTAGC
ACGACTTCAACCCCACCACCTAACGATAAACCATATTTCTTAGG
731673
731674
CTTTCAATTCTATAGTAGATTAGC
AAGTTTTTATTTTTTCTGATAATTTATTGAACGAAATGGAC
731738
731739
CTTTCAATTCTATAGTAGATTAGC
CACTGATAGGGATTGCCATTACTGTGATTATTGCACTACT
731802
731803
CTTTCAATTCTATAGTAGATTAGC
TTTAAAGTCTAGCTTACCGTTGTCGAACTTCATAAAGAA
731865
731866
CTTTCAATTCTATAGTAGATTAGC
GCCTTTGCAGGAATTTCTAAAGGATAAGAATAAACAGGAA
731929
731930
CTTTCAATTCTATAGTAGATTAGC
AAGAAACTACAACACCACCGTCAATTTCGAAGTTCAAACC
731993
731994
CTTTCAATTCTATAGTAGATTAGC
AAGAACAGAAAGGAAAACGATCTGAAAAGGAGAATAATA
732056
732057
CTTTCAATTCTATAGTAGATTAGC
ATAAATTATCTTCAAGAAAGAGGAAAAAGTGATATACAA
732119
732120
CTTTCAATTCTATAGTAGATTAGC
TAGTCAATAAATGTCTGATTGTTGTTTTCCAACTCTAAA
732182
732183
CTTTCAATTCTATAGTAGATTAGC
CATACCCGACACAAGAAAGTATGTTGAGGATTATGCCAAC
732246
732247
CTTTCAATTCTATAGTAGATTAGC
TTATTCTCAGCGACAAGGTCTTTGAAATAGTAAAATGGAAAG
732312
732313
CTTTCAATTCTATAGTAGATTAGC
CTAGATATAATATATTATATTTGGTCCATAGGAGGACCAG
732376
732377
CTTTCAATTCTATAGTAGATTAGC
TCTTTAAATCTCATTTCTTTCACCATTTATCTTTTCTCA
732439
732440
CTTTCAATTCTATAGTAGATTAGC
AAGAAAATAAAAAGATTGAAATTCTTAAAGCTTACAAGAG
732503
732504
CTTTCAATTCTATAGTAGATTAGC
TTGGAATATTTTTACAAGGTGTAGAATTAATTGGAATTT
732566
732567
CTTTCAATTCTATAGTAGATTAGC
732590
Left flanking sequence : Till position 725209 (length
bp)
ATAAATTACCTACTCTTAACTCTTACTAGAATATTACCCGCTCCATTAATAGGGAAACCATTACCTTATT
CCTTTGGTGTGTAGTCGGGGAAACGTATGA
Right flanking sequence : From position 732590 (length
bp)
TGAGGGTTTTTTAACCCTCTATTTGATCTTTTCTTCTCCCTTTCTTATAAGTTTTTCTTCTCTACTCTTC
GATTAGTATTATATTACTCTTTCTTATCTT
Print the CRISPR sequence : From position
bp To position
bp