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CRISPRs details
NC_017278_2
Flanking alignement tool
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NC_017278_2                                                                                                                 
top
Strain :
Thermus sp. CCB_US3_UF1
RefSeq :
NC_017278 (chromosome circular)
CRISPR id :
NC_017278_2
DR consensus (30 bp) :
GTTTCAAACCCTCATAGGTACGGTCAGAAC
Number of repetitions :
18
Begin Position :
256084
End Position :
257261
256084
GTTTCAAACCCTCATAGGTACGGTCAGAAC
TCGGGTTCCTGGACGGGCATACTTCACCCCCATCCTGTC
256152
256153
GTTTCAAACCCTCATAGGTACGGTCAGAAC
CAACGGACACTACCTTGCCGACGCCCTGGAAGCAGG
256218
256219
GTTTCAAACCCTCATAGGTACGGTCAGAAC
GAAAGGGGGCGGTACATGGTGTCGCCGTACCTAGCCGC
256286
256287
GTTTCAAACCCTCATAGGTACGGTCAGAAC
CCTCCGGAGGCTCGCCAGCCTCCGCCCCACTATTTCGGG
256355
256356
GTTTCAAACCCTCATAGGTACGGTCAGAAC
CTGCGGGACTTCCACACCACCCCCCGGTCCAAGAGCCGCCC
256426
256427
GTTTCAAACCCTCATAGGTACGGTCAGAAC
GGCTAGGGCGGCCATAGTTTTGGGGGCGGGCTCAGTGCC
256495
256496
GTTTCAAACCCTCATAGGTACGGTCAGAAC
AAGGCCCCCAAGGCCAAGGCGGCCCCGGGGGAGGT
256560
256561
GTTTCAAACCCTCATAGGTACGGTCAGAAC
CTTTCAATGAAAATAAAGCTAGATTTGCATTAAGGT
256626
256627
GTTTCAAACCCTCATAGGTACGGTCAGAAC
AAGCGTGCGTTTACCCATATGATATCAGCTTTTGCCT
256693
256694
GTTTCAAACCCTCATAGGTACGGTCAGAAC
ATGTTGAAGCATGCTATCCAAAGCATGCTTCAGTA
256758
256759
GTTTCAAACCCTCATAGGTACGGTCAGAAC
GGGGGGCTTGCGCTAGGTGGCCCTCATGGGCGATAAAGG
256827
256828
GTTTCAAACCCTCATAGGTACGGTCAGAAC
CAGAGCAGTCCCGTAGCCTATGGCCGCATACCGAAG
256893
256894
GTTTCAAACCCTCATAGGTACGGTCAGAAC
GGGGGCGGCCAAGGCCGAGGCCGAGGCCCCCAAGGCGGT
256962
256963
GTTTCAAACCCTCATAGGTACGGTCAGAAC
CGCCACGAACTCTATTGGAAACGAACTTTTTGAGGG
257028
257029
GTTTCAAACCCTCATAGGTACGGTCAGAAC
GAGGGTCATGATGATTGAGAAGATTTGGGGCATGCTC
257095
257096
GTTTCAAACCCTCATAGGTACGGTCAGAAC
AGGGTGGCGGTAGCAGCTTGGGGGTCCATGGCCTCCAC
257163
257164
GTTTCAAACCCTCATAGGTACGGTCAGAAC
GAATAGCCTGCTGGAGTACCAAGAAGATGCGGTTACCG
257231
257232
GTTTCAAACCCTCATAGGTACGGTCAGAAC
257261
Left flanking sequence : Till position 256084 (length
bp)
CTGTAGCACGCCCACAAGGTCCTGCAGCCCCTTGACCTGCTTGGCCTTCAGCACCGGGTCTTCCAGTACC
CTAAGAAAGGCCATCAGCTCCAGAAGCCCT
Right flanking sequence : From position 257261 (length
bp)
AGCAGAAGCTGCCCTCTGGACGAAAGGCTCTCATAAAAAGTTAATGTTTGTTATCAAGAACCCCTGCGGC
TGCAAAGGAAAATATGAGCCGCCTATCGGT
Print the CRISPR sequence : From position
bp To position
bp