Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017316_1                                                                                                                 top


Strain : Enterococcus faecalis OG1RF RefSeq :NC_017316 (chromosome circular)
CRISPR id : NC_017316_1
DR consensus (37 bp) : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTNumber of repetitions :8
Begin Position : 422486 End Position : 422984

422486GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTTTGCCACTTGCGAGCTTCACCAGAGCTAT 422551
422552GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTAGGTTTCAAGTGTGAATAGGTACGGTCTT 422617
422618GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTATAAATTCTACCCCCATGTTATAAAACGG 422683
422684GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTTTAGGTAGTTTTTTAACGCACTTACTTCT 422749
422750GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACTGCCGTCGGAACCGTCCCGACTTCCTAACA 422815
422816GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACATTTTGAGACATGGTCGTTTCGTTTTGAAT 422881
422882GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAATCTCTAATGAGCATTCATTACATATGTAGAAC 422947
422948GTTTTAGAGTCATGTTGTTTAGTTTTCGCAAATACGA422984
Left flanking sequence : Till position 422486 (length bp)
AAGCTTAAATTGTTACTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTA
CGGAACTTTGGAAAAAAATAATTCTCCGAG
Right flanking sequence : From position 422984 (length bp)
TATGATTGATGTAAAAATATCGTTAATATGTATAAATGTGATTGTTATATAAAAAATATAAGTAATAAAT
TGAAGCTTTGCTAGAGCAAGTGATGCGATT
Print the CRISPR sequence : From position bp To position bp