Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017317_2                                                                                                                 top


Strain : Corynebacterium ulcerans 809 RefSeq :NC_017317 (chromosome circular)
CRISPR id : NC_017317_2
DR consensus (36 bp) : ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACNumber of repetitions :13
Begin Position : 111684 End Position : 112598

111684ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACGCCTCCATGCTCATCAGTGAGAACCCCAACGCCGG 111754
111755ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACTGCCCTCATAAGCCGAACCGCTAGCGATCTCTTCCAT 111827
111828ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACCTAGCGAAGATTCGTGCTGCTGCACGCCGCGCAAATAT 111901
111902ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACTTGATTAAGCGCGCGATTGGTGCGGACTTCGAC 111970
111971ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACCCGTATTGTGGATGCTGCGATTGCGAAGCTCAAGG 112041
112042ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACTTCCGGGTCCATCCGGTGGGGCCCATGGCACGGTTGAAG 112116
112117ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACGCTGGTGTTCCGTCATTGGCGTATATTCTTATGGTAGCC 112191
112192ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACTGATGGGATTGATGCGCGGTTCCTTGGCCCTATTCGGG 112265
112266ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACGGGTATCGGTGGATTGGCTTCTGCCATAAATCCTCAAA 112339
112340ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACTTTTACATGGACGCCATCGCTAAAGGAATAGCCATGGGG 112414
112415ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACTCCATCAACAATGACGGGGATGATGATTTTGGTGGTC 112487
112488ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACTCAGGGTCGTAGGCGAGTTCTGTGTCTTCTGCGGGGAAA 112562
112563ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGAC112598
Left flanking sequence : Till position 111684 (length bp)
TGGGGAGAAAGCACGGCTATGAGCTTAGCAACAGCCCGCGCCATTGCGCAGATCTCGAGCACCAGCGCGT
CCGATGAGGACCGCGCAGCCCTACAGCGTC
Right flanking sequence : From position 112598 (length bp)
AGCCCCCTCATTTTAACTGACTTAACCTCGGTATTTGCCCTTTTATTGCGAAGTTCTCGACTTTTATGAA
GTTATTTTCCAAAAGGGTGATTGTTGTTGC
Print the CRISPR sequence : From position bp To position bp