Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017349_3                                                                                                                 top


Strain : Staphylococcus aureus subsp. aureus LGA251 RefSeq :NC_017349 (chromosome circular)
CRISPR id : NC_017349_3
DR consensus (24 bp) : TTCTCTATGTTGGGGCCCCGCCAANumber of repetitions :4
Begin Position : 1677159 End Position : 1677354

1677159TTCTCTATGTTGGGCCCCATCCCCAACTTGCACATTATTGAAAGCTGACTTTTGGTCA 1677216
1677217GCTTCTATGTTGGGGCCCCGTCCCCAACTTCCATTGCCTGTTGAATTTCTTTACGAAA 1677274
1677275TTCTCTATGTTGGGGCCCCGCCAACTTGCATTGCCTGTTTAAATTGGGGTTCCAAT 1677330
1677331TTCTCTATGTTGGGGCCCTGCCAA1677354
Left flanking sequence : Till position 1677159 (length bp)
TAATTAGACTCATGCATAGGGAGTGGGACAGAAATGATATTTTTACAAAATTAATTTGTTTACCCCCAAC
TCTCATTGCCTGTAGAATTTCTTTACGAAA
Right flanking sequence : From position 1677354 (length bp)
TATAACATTGTAGAGCCTAGGACATTGTGATGTCCCAGACTCTATCATCATGAATTATTCTCATCAAAAA
CTATCTTTCGTCATTTCCAACGCTGAAACT
Print the CRISPR sequence : From position bp To position bp