CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_017461_1
Flanking alignement tool
Page manual
  
Home Page
NC_017461_1                                                                                                                 
top
Strain :
Fervidicoccus fontis Kam940
RefSeq :
NC_017461 (chromosome circular)
CRISPR id :
NC_017461_1
DR consensus (24 bp) :
GAATCTCTCAGATAGAATTGAAAG
Number of repetitions :
13
Begin Position :
37
End Position :
794
37
GAATCTCTCAGATAGAATTGAAAG
TTGGCATATTTACTCCCCTTGCTCAGAATCAAGCATT
97
98
GAATCTCTCAGATAGAATTGAAAG
TTCACAAATTTAGTCACAAATGCGCTAGGAAACAGAA
158
159
GAATCTCTCAGATAGAATTGAAAG
TCAAACCCATGCTTTCTTAGTATTTCTGCTGCTTCT
218
219
GAATCTCTCAGATAGAATTGAAAG
CTCTTGCTAATGCTCTAGCAGTCGATCATAGTAGGC
278
279
GAATCTCTCAGATAGAATTGAAAG
AATAGCAAAATCCACTTATCGCCTACCCAATCTTTAAA
340
341
GAATCTCTCAGATAGAATTGAAAG
ATTTTAAGCGGGATCGTGGCTCCTGTGCTGTCAACCG
401
402
GAATCTCTCAGATAGAATTGAAAG
TTGCCTTTATCGGTAATGTATATTTTCCGGCTTACAT
462
463
GAATCTCTCAGATAGAATTGAAAG
AACCATCCCCAAACATATTGAATACCGCTAAGTATAGC
524
525
GAATCTCTCAGATAGAATTGAAAG
CTTGAGACCCCTTGCCCAACTCCTGCTGAAACACTTAT
586
587
GAATCTCTCAGATAGAATTGAAAG
TATACAGACCATCTCTCACAGCATCAGCTACAGCCAT
647
648
GAATCTCTCAGATAGAATTGAAAG
AGAATTGTAAGTGAAGCAATCGCAACAACAATAACTAA
709
710
GAATCTCTCAGATAGAATTGAAAG
AACTCTTCCATGTATTCAACCAAACTTTCCAAATCCT
770
771
GAATCTCTCAGATAGAATTGAAAG
794
Left flanking sequence : Till position 37 (length
bp)
TCTGAAAAAATCATCACAACAATCAGCTTTTTCCCT
Right flanking sequence : From position 794 (length
bp)
TTAAAATTAATAGCGAAATTCAAGCGGTGATTCATAAGAACTTCTTCAACACTTCCTCTATAGGGAAACT
TTCCTTAGATCTTATCCATGCTTCTTCAAC
Print the CRISPR sequence : From position
bp To position
bp