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CRISPRs details
NC_017569_3
Flanking alignement tool
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NC_017569_3                                                                                                                 
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Strain :
Riemerella anatipestifer RA-GD
RefSeq :
NC_017569 (chromosome circular)
CRISPR id :
NC_017569_3
DR consensus (47 bp) :
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
Number of repetitions :
13
Begin Position :
1449546
End Position :
1450516
1449546
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TTCTTAATTGTAATGCTTTAGAAAGTAGTT
1449622
1449623
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TATCCCATCGCACATCTGTTTTATTTTGTC
1449699
1449700
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TTTATTAAATAATTTAATTAGCTGAAAATC
1449776
1449777
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
GAGGTGTTGTCATATCTCAATCTCGTCTAT
1449853
1449854
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TACTTCGTTTATTAGTTTTATTGCAATGTT
1449930
1449931
GTTGCGAACTATCACAAAGATAGTAAAAATTGAAAGCAATTCACAAC
TAGATACATCTCTTTATCTTCGTGTAAAAT
1450007
1450008
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
GTCTTTGAGGTAAGGTTTTGTCAAATCCCA
1450084
1450085
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
TAATGGAGATTATAATATCCAGATACAAAC
1450161
1450162
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
TCTATCGAAGTGTTTAAAAACACTTGATTT
1450238
1450239
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
GATATAGTATCAGATGAACCGACAACGGAC
1450315
1450316
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
TGATTGACTCTATTTTCTCCTGTGCAGATA
1450392
1450393
GTTGCGAATTATCACAAAGATAGTGAAAATTGAAAGCAATTCACAAC
TTATTAAAAGTTTTCCGATACTTCCTATGT
1450469
1450470
GTTGCGAACTATCACAAAGATAGTGAAAATTGAAAGCAATTCATAAT
1450516
Left flanking sequence : Till position 1449546 (length
bp)
AAAAGACTTTACATCAAACAAAAATAGAGAAGAAATAGTAAAAAATCTAATCCTATAAAAACGCAAAACC
CATTGAAAAACAATGGGTTTATTTTTTGAG
Right flanking sequence : From position 1450516 (length
bp)
ATTACTGTTTGTTATTGGTTTTATTTTTTAAGATATAAAACACGCTTCCAATTATGTAAACCGACACAAT
TAAATTAGATACTAAATTAAAAATCCCTAT
Print the CRISPR sequence : From position
bp To position
bp