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CRISPRs details
NC_017588_1
Flanking alignement tool
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NC_017588_1                                                                                                                 
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Strain :
Thermus thermophilus JL-18
RefSeq :
NC_017588 (plasmid pTTJL1801 ci)
CRISPR id :
NC_017588_1
DR consensus (29 bp) :
CGGTCCATCCCCACGCATGTGGGGACTAC
Number of repetitions :
22
Begin Position :
41060
End Position :
42372
41060
AGGTCCATCCCCACGCATGTGGGGACTAC
AGGGACCGCCCCAAGACCCTGGAGGAGCTCTA
41120
41121
CGGTCCATCCCCACGCATGTGGGGACTAC
CCGCCCGGAGCCGTAGCGGAACCACAGGGCGGC
41182
41183
CGGTCCATCCCCACGCATGTGGGGACTAC
ACCCACACCATCGTCCTCCCCGCCGCCATGAC
41243
41244
CGGTCCATCCCCACGCATGTGGGGACTAC
GCTTACCTCCGAGATGCTCTGGGTTGGGGTTGT
41305
41306
CGGTCCATCCCCACGCATGTGGGGACTAC
TCAACGACTGGACACCTACACTGAGGTCTCGC
41366
41367
CGGTCCATCCCCACGCATGTGGGGACTAC
GTTTCCCTAATGAGGCCGAGTTTGTACGCTCC
41427
41428
CGGTCCATCCCCACGCATGTGGGGACTAC
GGGAGGACGCGGCGCACGCTGTGAACGGGGCC
41488
41489
CGGTCCATCCCCACGCATGTGGGGACTAC
TCTTCCATCACCTCCCACCAGTCCCGTAGCT
41548
41549
CGGTCCATCCCCACGCATGTGGGGACTAC
TTTCCCGCCCACAAGCCTTTTCCCGTCCTCCC
41609
41610
CGGTCCATCCCCACGCATGTGGGGACTAC
GAGCTCGCGCGTCTCAAGGAGGGCCAGCCCTT
41670
41671
CGGTCCATCCCCACGCATGTGGGGACTAC
GCGGGCTCGGTAGTAGGCGCGGGCTCGGTAGC
41731
41732
CGGTCCATCCCCACGCATGTGGGGACTAC
AGGGGGATCACCTTCTCCAGGAAGGGTTGCGC
41792
41793
CGGTCCATCCCCACGCATGTGGGGACTAC
CGGCGGAGGGTGGGAACGTCAAGGTAGGGCAC
41853
41854
CGGTCCATCCCCACGCATGTGGGGACTAC
TCGGCCCTCCCCTCATCGGTAATGAAGCCATT
41914
41915
CGGTCCATCCCCACGCATGTGGGGACTAC
CCCCACCCGCATCGGCCAGCCCGCCGCCAGGG
41975
41976
CGGTCCATCCCCACGCATGTGGGGACTAC
TCAATGAACGCGTCCGCTTGCTCGGGGTTGAG
42036
42037
CGGTCCATCCCCACGCATGTGGGGACTAC
AGGGACTCCATCATGGCCTTGTCAATACGATA
42097
42098
CGGTCCATCCCCACGCATGTGGGGACTAC
GCTTTCCACATCCGAGAGGGGATGCAACAGGT
42158
42159
CGGTCCATCCCCACGCATGTGGGGACTAC
GTTCAGCAGCTCATTCCATCTAGGCGCCAGCTC
42220
42221
CGGTCCATCCCCACGCATGTGGGGACTAC
GGCGCCCTCGCCCTTGCCGCCGCCCTGGTGGG
42281
42282
GGGTCCATCCCCACGCATGTGGGGACTAC
GATGGCCAGGAGGACCAGCCCACCCTCCGAGGC
42343
42344
CGGTCCATCCCCACGCATGTGGGGACTAC
42372
Left flanking sequence : Till position 41060 (length
bp)
GCCATAAAAGGGCAACGGCCCCCTGGAGGGCCGCGCGTCCTGCACCGGGCTATCGGGAACCCAGGCCCAG
CCCGGTGGGTTTGCCTTCATCCTACCACCC
Right flanking sequence : From position 42372 (length
bp)
ACATGACCAGGACGGCAAAAATGCCCGCTCACCCCCCTTTATGTGTCTATTTGGGAAGGATTGCAGGTTT
TTCTGTCAAGTTCCCCAGCGCCCGAGCGGG
Print the CRISPR sequence : From position
bp To position
bp