CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_017737_3
Flanking alignement tool
Page manual
  
Home Page
NC_017737_3                                                                                                                 
top
Strain :
Helicobacter cetorum MIT 00-7128
RefSeq :
NC_017737 (chromosome circular)
CRISPR id :
NC_017737_3
DR consensus (37 bp) :
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
Number of repetitions :
34
Begin Position :
1563836
End Position :
1566442
1563836
GTTTAAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TCATCTTAGGGGTTCGCTAGTAAGAAGTCTAAATAATTA
1563911
1563912
ATTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TCAGTATGAATATCCTTATGATGATAAATAATCTACTCT
1563987
1563988
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TTCAAATAGAATAGGCTCTTCTGGCTCATACTTAATGCCTTGAT
1564068
1564069
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TTAAAATATCAAATGCAATCTTCTCCAGAAAGCGATTATATTAAG
1564150
1564151
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
AAATATTCTAAACAGCCTCAAAGAACAACCCATCAAGTTAAT
1564229
1564230
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
ATTACTATAATTCTCAAGAGAAAGAGAATGAGGAAATCGC
1564306
1564307
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
CTAAAAAAGTCGCCACACAATGCGAATAATCCCTGCAT
1564381
1564382
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TTCTATAGAGGAAATTGCTAATAATATTTTGAGTTATTCT
1564458
1564459
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
GGTAGCTGGATTAGAATTGATTAAGATAACTCTATAACCCA
1564536
1564537
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
GAGTTCAATGAGAAGTTATCAGAATTTGATTTCTCATTAG
1564613
1564614
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TTTAAAAGCATCAAGCACTTAAATCCACCAAAAAATA
1564687
1564688
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TAAAGAAAGAAGAGCTGCTTTAGCTAATATCCAAAATTGC
1564764
1564765
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
CCTTCTTTATCTTTACCAATAATAACGTGAGCTTGGCAA
1564840
1564841
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
CCTTCTTTATCTTTACCAATAATAACGTGAGCTTGGCAA
1564916
1564917
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
GATAGTTCAATGAAGATTTACGTTAGTAGAGCTGAAATTAA
1564994
1564995
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TCCTCATATTTACATTCACATTGACCTTCATAAAAGCACA
1565071
1565072
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TTGCTTTAATGGCTGATCATAATTATCCTATGGAGAAGGG
1565148
1565149
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TACTATAAGAGATAGGTTCTTATAGAGATTTGACTTAAATTGC
1565228
1565229
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
AGAGCTTATAAGTTCTTCACTAAAGATAAAGGTAAAGAG
1565304
1565305
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
AAATTACTTAAGAGAGGTTTTGCCTATTAGAAAAATAAATTAT
1565384
1565385
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
ATCTCATACTTATCATGCAGAGAGCTAATAGGGAAATAGT
1565461
1565462
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
GCAATATAATAACATGCTGAAAAGATTAAGTGTCTTAAAA
1565538
1565539
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TCTTACCCACTAAAATCATGCCCGCACTCACATAAGTGCC
1565615
1565616
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
AATGGGTTACCTTGATGGTTAAAATTATAAGTAGGTGTTC
1565692
1565693
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
GACCAACCACTAAACTTTGCAAAATGCAGTAATCAACAAAAAGC
1565773
1565774
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
GACCAACCACTAAACTTTGCAAAATGCAGTAATCAACAAAAAGC
1565854
1565855
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TTATATTAAATTCAATGTTGGAAAATACAAAGATGAAGAGTA
1565933
1565934
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TGGAGTTTATATTAAAAACGTAGAGAAAAGTAATTATCTTC
1566011
1566012
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TTGCTAAAAAGCCTTCACTATGCGCCAATGCACTCCAAG
1566087
1566088
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TTATTATGAGTAATGTTTTTGTTAGAACGGATTATAAAAC
1566164
1566165
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TCACAAATTTTATTTTGTAGCTCTTGGCATTGAGACATTGTTGT
1566245
1566246
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TCTAAAGGCGTGAATTGATTAAAAATTTGTGAAATTTTAGGATAA
1566327
1566328
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
TTCGCTTAAAAGCATTTGATAAATGCGTATTGCATAATAGC
1566405
1566406
GTTTCAATCCCCTTGAACGGGTCAATCTGTAATAAAT
1566442
Left flanking sequence : Till position 1563836 (length
bp)
TTGATTATACCAATGAATAAAACCTAGCCTCATCAACACAAAAAAATCTTTAGCCGTGATTAAAATGTAA
TTTTCCTTAAAAATTGCTTAAATATTTCAT
Right flanking sequence : From position 1566442 (length
bp)
AGCCTTTATCACAGAGTTTAAAGACTTTTGATTCTATTCAAAAATCCCTTAAATCCTCCTAAAATACGAG
CTTTTTAGAAAAAGTTCGCAAATCCCCCTA
Print the CRISPR sequence : From position
bp To position
bp