Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017761_2                                                                                                                 top


Strain : Helicobacter cinaedi PAGU611 RefSeq :NC_017761 (chromosome circular)
CRISPR id : NC_017761_2
DR consensus (36 bp) : GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACNumber of repetitions :9
Begin Position : 1748910 End Position : 1749473

1748910GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACATCCAGCTATATCTTCAGCACTACAAGATG 1748975
1748976GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACATCCAGCTATATCTTCAGCACTACAAGATG 1749041
1749042GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACATCCAGCTATATCTTCAGCACTACAAGATG 1749107
1749108GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACAGAGAAGAAACAGCAAGCTAATTAATCAAA 1749173
1749174GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACTGATTTTGGCAAGTAATGATTATTTGGTAG 1749239
1749240GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACTAACCTTTGCTTCTGTCCTTGCTATACTTG 1749305
1749306GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACTAACCTTTGCTTCTGTCCTTGCTATACTTG 1749371
1749372GTTTTAGTGGGACCCGATTTGTGAGGGGATTGCAACTACACGCTCACAGCCCATAAGCTAGATTCA 1749437
1749438GTTTTAGTGGGACCCGATTTAAGGGGATTTGTATCA1749473
Left flanking sequence : Till position 1748910 (length bp)
ACATTTTGGTATGACTTGTTTAGATAGAGTTGCGTGTTTTAGGATATTTCAAGCTTTGAAAACGCTCAAA
GCACACACTAGAGCCGACTTGGAAAAGTCA
Right flanking sequence : From position 1749473 (length bp)
CTCTAATGCTTTTACTTGTTGTATCAAAGTTTGTCTATCTTATGTCATTACTAGGGCTTTGCCAAAGTAT
ATAATCCACACAAACAAAAATCCTGTTATT
Print the CRISPR sequence : From position bp To position bp