Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_017941_5                                                                                                                 top


Strain : Haloferax mediterranei ATCC 33500 RefSeq :NC_017941 (chromosome circular)
CRISPR id : NC_017941_5
DR consensus (30 bp) : GTTACAGACGAACCCTAGTTGGGTTGAAGCNumber of repetitions :21
Begin Position : 1259098 End Position : 1260440

1259098GTTACAGACGAACCCTAGTTGGGTTGAAGCGAACAGGATGGCGAACGCGGTGTCTGCGCCAGTT 1259161
1259162GTTACAGACGAACCCTAGTTGGGTTGAAGCCACGACAATCAAGTCTGGTTGCATGGCGACACGGA 1259226
1259227GTTACAGACGAACCCTAGTTGGGTTGAAGCCTGTGGCCTCCAGCGGCCGTCAGACAGTCGCATCCGA 1259293
1259294GTTACAGACGAACCCTAGTTGGGTTGAAGCAAGAAGCCGCTCGCCGTCCTCGATGACGGGCGGGCG 1259359
1259360GTTACAGACGAACCCTAGTTGGGTTGAAGCGACAAGACTCGCGACGAAGCCGAGTCGAAACGCCGC 1259425
1259426GTTACAGACGAACCCTAGTTGGGTTGAAGCCTCTTTATCCCTCCTGCCCGAATGTCTACGAATATC 1259491
1259492GTTACAGACGAACCCTAGTTGGGTTGAAGCGAACCCACTGGTGAAGAAAAAGTTGTAGAGACCCTA 1259557
1259558GTTACAGACGAACCCTAGTTGGGTTGAAGCACGACAATCAAGTCTGGTTACATGGCGACACGGATGG 1259624
1259625GTTACAGACGAACCCTAGTTGGGTTGAAGCTTCCACAACGTCGGGGAGGGCGAAATTAGCCAAGCA 1259690
1259691GTTACAGACGAACCCTAGTTGGGTTGAAGCTCCCGCTGGGGATGTCGGGAGTGCCGGGCGAGCCA 1259755
1259756GTTACAGACGAACCCTAGTTGGGTTGAAGCCCCGGCCCGTTGCCCCCCACGGCAATCGTCTGCT 1259819
1259820GTTACAGACGAACCCTAGTTGGGTTGAAGCCGTCTGTGTTATTCTGTGCGTCTGCCGCGACAAC 1259883
1259884GTTACAGACGAACCCTAGTTGGGTTGAAGCATTGCCTGTCCCCGTCGTGTAATCAACTCGGAATC 1259948
1259949GTTACAGACGAACCCTAGTTGGGTTGAAGCGAGATGTGCGACCGCGGCGAAATGAGCAGTTCGTG 1260013
1260014GTTACAGACGAACCCTAGTTGGGTTGAAGCGCGACATGGGGACCGTCGAGAACGCGCTCTATGGGGA 1260080
1260081GTTACAGACGAACCCTAGTTGGGTTGAAGCCGAGGGTCCCGGTGTCGAGAGGACCGGGACGGACGGA 1260147
1260148GTTACAGACGAACCCTAGTTGGGTTGAAGCTCGGTAATCTGGGAGGCGTCAGTCTCGGCCGAGTAATC 1260215
1260216GTTACAGACGAACCCTAGTTGGGTTGAAGCCTCGCCATCGCCGCGAACTCGGTCCTCCTCGGGGTG 1260281
1260282GTTACAGACGAACCCTAGTTGGGTTGAAGCAAGCCTTGAGAGTGTCTGTTGGTATGATGAATGTT 1260346
1260347GTTACAGACGAACCCTAGTTGGGTTGAAGCAAGTAGACCGCGCTCAGTTACGACAGCTGCTCGA 1260410
1260411GTTACAGACGAACCCTAGTTGGGTTGAAGC1260440
Left flanking sequence : Till position 1259098 (length bp)
TTCCGTCGACCCCCCGGGGGGTTGGGGGGTATTGGGGGTCGACGGAAACTGTTGAGTGGGAGTAGTGTGT
AGGAGGCTGTATACCCTCGAATCGGGCATG
Right flanking sequence : From position 1260440 (length bp)
ACGATGATCTCGCCAGTCTGCAGCGTTACATTGGGTTACAAACGAATCTTTTCTCGTGAGGACTTCCGAA
ACTAACCTCTTCCCGGAACTAGTCGAAGGT
Print the CRISPR sequence : From position bp To position bp