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CRISPRs details
NC_017941_7
Flanking alignement tool
Page manual
  
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NC_017941_7                                                                                                                 
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Strain :
Haloferax mediterranei ATCC 33500
RefSeq :
NC_017941 (chromosome circular)
CRISPR id :
NC_017941_7
DR consensus (30 bp) :
GCTTCAACCCAACTAGGGTTCGTCTGTAAC
Number of repetitions :
25
Begin Position :
2483675
End Position :
2485313
2483675
TTGCTATCGGACTTGGTCTCGAAGACGTCG
CTGTTGCTCTTGAATGTAACATGACGACGAAATTCACTGGCGCGCCC
2483751
2483752
CCGAGTGTGGTTGTCCTGATGTTCGGCTCC
GGTGCTGTCGATGGTGATAGACTCGTCCCCGTCCAC
2483817
2483818
CACGCGCGCGAGGCGATTAACGTCGTCACC
TCGTCGTCGGGCGTGGGTTCGACTACGATTTCCGC
2483882
2483883
GCCGGTCGAGAGTGCACAAAACAGAAGTAA
AGATTTTCAAGCGCGAGTTCGGTATTTGACTGCT
2483946
2483947
TCGAGGTATGCGAGGTGTTCTTACGACGAG
CCGGGGTTTACGACGTGAAGAAGGTGCGTCCAGAA
2484011
2484012
ATCACCGGAGAAGAGACCAAGGAACGCATC
GCCCTGGTCGTCGACCGGCCCGAAGACTGTCACG
2484075
2484076
CGGTGGGAGAGATCACCGGTCGCAACCCAC
CTGCGACCCTCCGGAATTGGGGTCTGCCCCAACGTA
2484141
2484142
GCATAATCGCCGACGAGTAGTCCCTGAACC
AAGCGTTGTAGAACAACATGGCCAGCTTCCAGAC
2484205
2484206
GCGGCCCCATCGGCACGTCTTCGTCGTTGT
TCTCACAACCCCCCCAAATCCTTCCCCCCATGCCGTGT
2484273
2484274
ACGTTCAGTTTCGTGAAGACGGCGTCCGTA
ACCTCTGGATAAATCTCCCCAATCTGCCGGAGGACCG
2484340
2484341
CGCCAGGTGCAACCTCGTCCAGTGCAGTGC
GATATGCGTTCCGGTCGGGCAACATTTCGAGACCGT
2484406
2484407
CGAAACCGAGGTCCTCGGTGAGCCATTCGG
AATTTCACATGGATTTCATGGATTGTCCCCTCGTCAA
2484473
2484474
GCCGTTCAGTTTCGCAATCTGGCCGACGAC
ACGTCATGCATGCAACGCCGATTGTTGCATTCGCG
2484538
2484539
CCGTGTCACCGGGCTTTGGCTCACCGACGT
ACGCGAAGGCCGGGTCTGCGGAGTACATGGGTCTGGTC
2484606
2484607
AGAACTCCTAGATACGCCGGGAGGTCGGCG
GACGCTCGAAGCCGGCGCGCTCGTCCTCGCCGACAAAG
2484674
2484675
GACGCTGTAATCTGCCCACGTCCCTTCGCC
TAGATGGTTCATACGTTACTCCCTCAATAATCTTC
2484739
2484740
CGCTCTCGACGACCTCGCCGACGATACCGC
GTCCAAATCGGGCAGGTGTACGACCTTCGCGTCGAA
2484805
2484806
ACGATTCGGTATCGCGCATCCGGCCGCGCA
CGGCGGGCCGTCGGGTCTGCGACACCTCCCACTCCCC
2484872
2484873
GAGTTCGCCACTCGTCGGCTCTGGACGTTC
CCGACGTTAGATTTTGTGACTCGTTTTGTACCTCC
2484937
2484938
CGCCATCCGGTCGCGCAGCGAAGTACCACG
ATTTAGCAGAGTCAGTCATTCCGAACCACCGTCCGC
2485003
2485004
CCTATAAAAGGGCCTTCGGGCTTCGGCACG
TGTCGAAGGCGACTACGTCTTAGCCGTCCATCCGTG
2485069
2485070
AGCGTTGTCGTCGACTCGCAGCAGCCGTCG
ACCATCGACGGCACGGTCGTGGGCGACCTCGTACAC
2485135
2485136
TGCCGCTGTGAGGAGGTAACCGTGAGCGTG
CGACTGTCGCGTCTTCGATTGGGGTTTTGGGTCC
2485199
2485200
CAATTTTCGAAGCATGGTTGAGAAACTACC
CAAGAGCGTGCGCTCGGAAGTCAACGCAACGCGCAAGGCACACGACCTGACGTG
2485283
2485284
GTTCATCGAAGCCATCGTGCCGTCAGGGTC
2485313
Left flanking sequence : Till position 2483675 (length
bp)
CTGAGTAAACTCGGTATCCCAACTGAGGACCGCGAAGAAGCCACGATTCAGAACATCGTCTCGAGTGCCG
ACCTCGGAACGACACTCAACCTGAACGCGC
Right flanking sequence : From position 2485313 (length
bp)
ACTCGTTGCTGGACCGCTAACGGTCGACGGCACCGCTCCTCACGAGTTCGTATTCGGATGCTCGCTCGGG
ATACTTTTCTCTGGGATATTCCGGAGACCC
Print the CRISPR sequence : From position
bp To position
bp