Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_018015_5                                                                                                                 top


Strain : Thermococcus sp. CL1 RefSeq :NC_018015 (chromosome circular)
CRISPR id : NC_018015_5
DR consensus (28 bp) : GTTTCAGAACCACATAATGTTTGGAAACNumber of repetitions :3
Begin Position : 1697106 End Position : 1697296

1697106GTTTCAGAACCACATAATGTTTGGAAACCTGAACACTACACGGCTGTAGTGAAGCTCTCCCTTTGCGCCCACGAGGCG 1697183
1697184GTTTCAGAACCACATAATGTTTGGAAACAGGTGCTCGACGCTCTGTATCGGGCCGTCCACCTCGACCTCCTTCACAATCTCCCCA 1697268
1697269GTTTCAGAACCACATAATGTTTGGAACT1697296
Left flanking sequence : Till position 1697106 (length bp)
GTTTTTGTTCTGGTGCTGTTTTCTGAACTTCTGGTAACCGCAAAATTTATATGGGGGTTTGGCGTTACTC
TATTTGCTCAATAGGGCAAAAAAGTTAACC
Right flanking sequence : From position 1697296 (length bp)
CCGTGGCCGGGGTAGCCCCGCCATAAGAGATTGATAAAAAGAGGGTGGCTTATTCTCCTCTGTATGCCCT
CAGGTAGAGCTCCCTTATCTCATCCGGCTT
Print the CRISPR sequence : From position bp To position bp