Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_018015_6                                                                                                                 top


Strain : Thermococcus sp. CL1 RefSeq :NC_018015 (chromosome circular)
CRISPR id : NC_018015_6
DR consensus (28 bp) : GTTTCCAAACATTATGTGGTTCTGAAACNumber of repetitions :8
Begin Position : 1709530 End Position : 1710076

1709530ACTTCCAAACATTATGTGGTTCTGAAACATCCTTGTAAGCAACAAAGCACACACGAAAAGTGACGTAG 1709597
1709598GTTTCCAAACATTATGTGGTTCTGAAACTCGAAGAAATCAGGAATACAATAGACGATTTCGACGAGCTCCCCGACAT 1709674
1709675GTTTCCAAACATTATGTGGTTCTGAAACACCATAACTTAAAATGAAGCGTTCGGTAACGCTCAAACT 1709741
1709742GTTTCCAAACATTATGTGGTTCTGAAACCGGGGAGTGCGATAAGCTTCCTCAGTTTTGCTAAGGAG 1709807
1709808GTTTCCAAACATTATGTGGTTCTGAAACGCGGATGAAGTTTGGAAGGCTATTAAAGAGGGTAAAATTAAGGGGTTCAGTATTGGTGG 1709894
1709895GTTTCCAAACATTATGTGGTTCTGAAACTCGTGAAAGTTGATGGTAATGTAGGATTCTTCAACGGAGAGCGCCTCGG 1709971
1709972GTTTCCAAACATTATGTGGTTCTGAAACATCATTCCAAGCGAAATGTCACCAACCAAGTTAGAGTTGATAACTGCTC 1710048
1710049GTTTCCAAACATTATGTGGTTCTGAAAC1710076
Left flanking sequence : Till position 1709530 (length bp)
AGCTCTCCGTTTTTATAATAGTGGGAACCACATTTTTTGAAAGCCCCTTCCTTCAGGGCAGAGGAAGAGC
CCAGAGATTGGGCAAGAAAAACAAATAGGA
Right flanking sequence : From position 1710076 (length bp)
GGTTAACTTTTTTGCCCTATTGAGCAAATAGAGTAACGCCGAACCCCCATATAAATTTTGCGGTTACCAG
AAGTTCAGAAAACAGCACCAGAACAAAAAC
Print the CRISPR sequence : From position bp To position bp