Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_018015_7                                                                                                                 top


Strain : Thermococcus sp. CL1 RefSeq :NC_018015 (chromosome circular)
CRISPR id : NC_018015_7
DR consensus (29 bp) : CTTTCCACACAATTCTGTCCTACGGAAACNumber of repetitions :22
Begin Position : 1722315 End Position : 1723753

1722315CTTTCCACACAATTCTGTCCTATGGAAACTCTACGATGCAGACAACGATCTTGACGTGACAATGCTTTC 1722383
1722384CTTTCCACACAATTCTGTCCTATGGAAACTTCGTCAAGGCATGGGATCTCATTCTTACACAATTCGA 1722450
1722451CTTTCCACACAATTCTGTCCTACGGAAACTCCTGGACGTCAAGGAAGAGTACGTACTCCCCGGGTTCGT 1722519
1722520CTTTCCACACAATTCTGTCCTACGGAAACGGGCAGAATCAGAACGTTTCAGCGCTCGCGAACATGACGA 1722588
1722589CTTTCCACACAATTCTGTCCTACGGAAACGCACAGAAGCCCTTGAGGCAATCAGCTCGCTGAGAGTG 1722655
1722656CTTTCCACACAATTCTGTCCTACGGAAACAGAAGTGATTAGAGCGGAGGAAGGCCCAAGGTAACC 1722720
1722721CTTTCCACACAATTCTGTCCTACGGAAACACATCACAAACCGCTCCTGGCCGACCTGGACGAAGTAA 1722787
1722788CTTTCCACACAATTCTGTCCTACGGAAACCAGAGAAATTCGGGGCTTTCAAGATTCCGGACGACAA 1722853
1722854CTTTCCACACAATTCTGTCCTACGGAAACTGCAGTTGCACGTGCCGTTGCTAATCCCCGTCCAGTTCACG 1722923
1722924CTTTCCACACAATTCTGTCCTACGGAAACAAAACGCTGTTTTCGTCCTCCTCTTCGACTTCGAAATCGA 1722992
1722993CTTTCCACACAATTCTGTCCTACGGAAACATGTTCGAGGAGGTTGAGAAGAATGGAGGCTGAAAAGGT 1723060
1723061CTTTCCACACAATTCTGTCCTACGGAAACAAGGAGGTGAAGACATGAGCACCCGCCTCTTTGACGT 1723126
1723127CTTTCCACACAATTCTGTCCTACGGAAACAGTATGACCCTCTCGACCTCCATCATGCCCACCACCTT 1723193
1723194CTTTCCACACAATTCTGTCCTACGGAAACTTATTGTTGCAGCAAGATCAGTATATATGTCAGGAGCA 1723260
1723261CTTTCCACACAATTCTGTCCTACGGAAACATGAGCGTGAACGTGGAACTTTACCCCTCCAGCGCGGCCGT 1723330
1723331CTTTCCACACAATTCTGTCCTACGGAAACTCATGAGCGACCCTCCTTCTCTACAGGGGGCAGTTCTT 1723397
1723398CTTTCCACACAATTCTGTCCTACGGAAACACGACCTCAGGGACGGCCCCACCGAGGTAAACGAGCT 1723463
1723464CTTTCCACACAATTCTGTCCTACGGAAACTCCGCGAGGTCCGGGTCCATGCTGAGAAGGTGATTA 1723528
1723529CTTTCCACACAATTCTGTCCTACGGAAACTTGACTTCTACTCGAACGTTTACAGGCAGAAGGTCAT 1723594
1723595CTTTCCACACAATTCTGTCCTACGGAAACCCTTCACTTCCGGCGGAACTACGTCCCGAATTCTAT 1723659
1723660CTTTCCACACAATTCTGTCCTACGGAAACTCCGGGACCGGGAACGTCGGCCCGTCCCTGGTCACA 1723724
1723725CTTTCCACACAATTCTGTCCTACGGAAAC1723753
Left flanking sequence : Till position 1722315 (length bp)
TTCTCAGAAAAGGTTTTTGGGAGTATACACAGCGCGACAACCGTGCACCACTTCTACGGAAACCGTCTGG
CCCTAGCTGGGCGATCGTCGCGACGACTCC
Right flanking sequence : From position 1723753 (length bp)
GCTCCGGGAATTCCCCGGGTTCTCGATTTTAAGTTCTTTCTTCACCGCTATTTAAACCTTGTTCTAAAAA
CCCGTGTCACCGCATTCTATTTATAAAGCC
Print the CRISPR sequence : From position bp To position bp