Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_018524_13                                                                                                                 top


Strain : Nocardiopsis alba ATCC BAA-2165 RefSeq :NC_018524 (chromosome circular)
CRISPR id : NC_018524_13
DR consensus (29 bp) : CTGCTCCCCGCGCACGCGGGGATGGACCCNumber of repetitions :2
Begin Position : 2254440 End Position : 2254529

2254440CTGCTCCCCGCGCACGCGGGGATGGACCCCGACGACGGCAACGCCCTACGCCTAGTCGACG 2254500
2254501CTGCTCCCTGCGCACGTAGGGGTGGGTCA2254529
Left flanking sequence : Till position 2254440 (length bp)
GCGGGGATGGGACGTTCCCCCCGAGTAGTGGACATCTCCGACACTGGTAACACGAGGAGGATGGACCCCG
GTACCGGCCCGCCCCATGGTGTATGAGGAG
Right flanking sequence : From position 2254529 (length bp)
GTCGCAGCTTCTATGGGTACTCCCGGGCAGGGCTGCACGCTATGCGGATGGGGAGCCGGGGACGTTGGGT
ATCAGGAACGAGGAGGGTGGAAATTCGGAA
Print the CRISPR sequence : From position bp To position bp