Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_018645_4                                                                                                                 top


Strain : Desulfobacula toluolica Tol2 RefSeq :NC_018645 (chromosome circular)
CRISPR id : NC_018645_4
DR consensus (37 bp) : GTCTGAACGGCATATCCAGAAGAACAAGGATTGAAACNumber of repetitions :9
Begin Position : 3489798 End Position : 3490420

3489798GTCTGAACGGCATATCCAGAAGAACAAGGATTGAAACCAGCAAGCTTAAGGGGCGAGGCATTAAAATAGTTGTT 3489871
3489872GTCTGAACGGCATATCCAGAAGAACAAGGATTGAAACCAGCCAACTATCTGGGTATGAATATTGCCGAAATGTT 3489945
3489946GTCTGAACGGCATATCCAGAAGAACAAGGATTGAAACCCAAGTCGCCTTTATCAACGGTGATCGTCGGCTCTG 3490018
3490019GTCTGAACGGCATATCCAGAAGAACAAGGATTGAAACATGTCGGTGAGGGCCTGATTTTCGAGACTCGTGTG 3490090
3490091GTCTGAACGGCATATCCAGAAGAACAAGGATTGAAACCCGGAAGGCCGCCACCCTCAGCGGTTGTTGAGTTCG 3490163
3490164GTCTGAACGGCATATCCAGAAGAACAAGGATTGAAACAACCTGGGGCGGCTTGTATAGCGCCCAAACCCATAAG 3490237
3490238GTCTGAACGGCATATCCAGAAGAACAAGGATTGAAACTGAGTTGATAAAAAACCGCACTGTAATTTTCAGCAA 3490310
3490311GTCTGAACGGCATATCCAGAAGAACAAGGATTGAAACCATGCTGTAATCTGTTCCGGTGTTGTCCAATTCACA 3490383
3490384GTCTGAACGGCATATCCAGAAGAACAAGGATTGAAAC3490420
Left flanking sequence : Till position 3489798 (length bp)
ATAATGAAGAATCCAATAATATTGGTTAAAATTTATATTATATTGTTCTTTGAAAATTTGTTTAACATAT
TTAAAATTAAAGGGAATTTTAAGAAATGAA
Right flanking sequence : From position 3490420 (length bp)
TGTGTCAATCAAAACGTCATATAGCTTGAAATCTCCTAAAACAGAAAAAAAGCATAAAGATAAAATGCCT
GCAAGCAGTTTGGGGTAACATTTATCTCAT
Print the CRISPR sequence : From position bp To position bp