Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019429_2                                                                                                                 top


Strain : Anabaena sp. 90 RefSeq :NC_019429 (plasmid pANA02 circu)
CRISPR id : NC_019429_2
DR consensus (37 bp) : GTTTCAATCCCTAATAGGGAGTAAGTGAAATTGCAATNumber of repetitions :5
Begin Position : 39917 End Position : 40243

39917GTTTCAATCCCTAATAGGGAGTAAGTGAAATTGCAATTCAGGTAATTTTCACCATTAGTTTTTGACTTTTTTA 39989
39990GTTTCAATCCCTAATAGGGAGTAAGTGAAATTGCAATATGAAGGTTGGGATAATGGCACAATTTTATAAAAT 40061
40062GTTTCAATCCCTAATAGGGAGTAAGTGAAATTGCAATTTTCTACGATCAGAGACTGCTGTCTACGATCAGA 40132
40133GTTTCAATCCCTAATAGGGAGTAAGTGAAATTGCAATTGCTTCCATTGTCGAATCACCGCCAGACAATTCCAGT 40206
40207GTTTCAATCCCTAATAGGGAGCAGGGGAAACGCATCT40243
Left flanking sequence : Till position 39917 (length bp)
TCTACTACATCAGCCCTCTCTCTTCATCCTCTTTTTTTGGCTACAGTATTGAAGTGAAATTGCAATTTTG
ACCTTTCTAATATTAATGCCACTTTTGGTG
Right flanking sequence : From position 40243 (length bp)
AAATTATCTTGACAGAATACTATATTAGTGCATCAATATGGGAAAATATCTAACTTCATTCAAAATCTGA
TAAATTCCTTTATTAAAATTATAAAAATTT
Print the CRISPR sequence : From position bp To position bp