Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019673_6                                                                                                                 top


Strain : Saccharothrix espanaensis DSM 44229 RefSeq :NC_019673 (chromosome circular)
CRISPR id : NC_019673_6
DR consensus (38 bp) : GCAGCGCTGGGAGCCCGCTTCCAGCGAGGATCGCAACGNumber of repetitions :7
Begin Position : 2095934 End Position : 2096408

2095934GCAGCGCTGGGAGCCCGCTTCCAGCGAGGATCGCAACGCTGCCGTCGCGGACGTGGTCGATCGCGGTGACGCTC 2096007
2096008GCAGCGCTGGGAGCCCGCTTCCAGCGAGGATCGCAACGACGACTCGCCGGCCTTCGGGCACGCCCGCCGGCTG 2096080
2096081GCAGCGCTGGGAGCCCGCTTCCAGCGAGGATCGCAACGCCGAACGCGATGGTGCCCCGGTGGCGACGTGCT 2096151
2096152GCAGCGCTGGGAGCCCGCTTCCAGCGAGGATCGCAACGGGCTCTTGGCCGGGTACCCGGGGCACTTGGTGAGC 2096224
2096225GCAGCGCTGGGAGCCCGCTTCCAGCGAGGATCGCAACCCGGTCGGCCTCGACGAGCGCTTGGTCGACGATCTG 2096297
2096298GCAGCGCTGGGAGCCCGCTTCCAGCGAGGATCGCAACTATGTGCCGTTCGAGGACGGGGCGGACATGGTTTCC 2096370
2096371GCAGCGCTGGGAGCCCGCTTCCAGCGAGGGTCGCAACT2096408
Left flanking sequence : Till position 2095934 (length bp)
CGCCGGTACGTTCCGAGGCCAACGTCGGCGTGTTATCCCGGATATTGGGACCTTAAGCGAGGTCACTTCG
CGACAGGGCAGTTTTCCCTGGTCATCCAGG
Right flanking sequence : From position 2096408 (length bp)
TGTAGTTTTGGGCCTCGTCGACCACCACGAAGTCGAGCAGCGCTGGAAGCCCCGCTTCCGGTGAGGACGC
ACAACATGATCAGGTTGTCTGAGAATGCCG
Print the CRISPR sequence : From position bp To position bp