Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019676_13                                                                                                                 top


Strain : Nostoc sp. PCC 7107 RefSeq :NC_019676 (chromosome circular)
CRISPR id : NC_019676_13
DR consensus (38 bp) : AATTGCAATTCAAACTAATCCCTATTAGGGATTGAAACNumber of repetitions :4
Begin Position : 3449201 End Position : 3449463

3449201AATTGCAATTCAAACTAATCCCTATTAGGGATTGAAACTCCTGCTTCAGTTCTGGCTCAATATCAGCCGTAAGCTTTGCAA 3449281
3449282AATTGCAATTCAAACTAATCCCTATTAGGGATTGAAACACGCCTAGCCCTGCAAGGTTAATTGCGGCGATTAA 3449354
3449355AATTGCAATTCAAACTAATCCCTATTAGGGATTGAAACAAGCTAATTTGTTCCCTGAGTTGTGCGCTGGAA 3449425
3449426CATTGCAATTTAAACTAATCCCTATTAGGGATTGAAAC3449463
Left flanking sequence : Till position 3449201 (length bp)
ACTATAGGGTTTAGCCATCTGAGTTTGAATCGCAATACTAGGAATACTTCATAGTTTATGTCCTAATCTT
ATTGGCTACAGCTATACTTAACAGTATATA
Right flanking sequence : From position 3449463 (length bp)
ATTATTTTACATTCTCATGAATACAATGAGATTTTGCGTAAGTTCTGTGAATATTTAGAGTTTGATTTTG
TTGGGTTTCGCTATTGCTCCACCCAACCTA
Print the CRISPR sequence : From position bp To position bp