Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation


Other Tools


GPMS Links





NC_019678_26                                                                                                                 top


Strain : Rivularia sp. PCC 7116 RefSeq :NC_019678 (chromosome circular)
CRISPR id : NC_019678_26
DR consensus (37 bp) : GTTTCCAACTAATCCGACTTAATCCAGTCGGCGGAAGNumber of repetitions :8
Begin Position : 6212788 End Position : 6213336

6212788TTATTCAACTAATTCGACTTAATCCAGTCGGCGGAAGATGACCCAATCGAACCAAGCGACATCCCAGAATACAA 6212861
6212862GTTTCCAACTAATCCGACTTAATCCAGTCGGTGGAAGTTGCTGTCAATTTCTGACAAATTGCAAAATGTAACTA 6212935
6212936GTTTCCAACTAATCCGACTTAATCCAGTCGGCGGAAGAACCAATCCTCCAAACCAAGATAGTAAAGACTCTT 6213007
6213008GTTTCCAACTAATCCGACTTAATCCAGTCGGCGGAAGTTAAGTCTTCCTGAAAACTCGAATGCAGACTTAGCAG 6213081
6213082GTTTCCAACTAATCCGACTTAATCCAGTCGGCGGAAGTCTTTAACTACGCTCACTAAAGAAGTAGACAGCAA 6213153
6213154GTTTCCAACTAATCCGACTTAATCCAGTCGGCGGAAGAACTCTCAATATAAGATATTGTCATTGAACTAAAAAA 6213227
6213228GTTTCCAACTAATCCGACTTAATCCAGTCGGCGGAAGCCTTAGCATAATTCTCAAGAGAATCTGCCATTTGA 6213299
6213300GTTTCCAACTAATCCGACTTAATCCAGTCGGCGGAAG6213336
Left flanking sequence : Till position 6212788 (length bp)
TACTAATTTTGTGACGACTTTTCGTATTGTTAAATAATCCTACTAATTAATCAAAAAATTACCCTCTAAT
TAGCTTTTAGAGGGTTTTTTCTAATTATTT
Right flanking sequence : From position 6213336 (length bp)
ACCGTCCCTTGAAACCCTTGCATGATAAGGATTCTACAACAGGTTTTGACGGGTCTAAAAAAAAGGTTCA
TTTCAGCCTCGCTTATTGATAATTAGTTTC

Print the CRISPR sequence : From position bp To position bp