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CRISPRs details
NC_019678_36
Flanking alignement tool
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NC_019678_36                                                                                                                 
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Strain :
Rivularia sp. PCC 7116
RefSeq :
NC_019678 (chromosome circular)
CRISPR id :
NC_019678_36
DR consensus (37 bp) :
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
Number of repetitions :
19
Begin Position :
7450340
End Position :
7451660
7450340
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
CCAAGTCTTAGTAATTACAGCCATTTTGATTTTTT
7450411
7450412
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
CTACCACGCATGATTGCGGATTTTAACACAGCTT
7450482
7450483
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
AGAAAAATATTTAAGCTATTCGAGGCTGAATTTTC
7450554
7450555
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
TTATAACCTTTGCTTGTTTGCTCAAGTACTAAA
7450624
7450625
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
CAGAGCTTTCAACTGCCTGCATAGGTTCAGAAGTT
7450696
7450697
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
CAGGATTATTCCCAGGCTTTCTCATAGTCACTAA
7450767
7450768
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
GAAAAGTCCTGCCCAGTATACTTGGGACAGTATC
7450838
7450839
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
TTAAGATTGAAGCGGTACGCTACTTTGTTACTAA
7450909
7450910
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
TTAGAACCCGTTGCCGCTTAACCCTCACTCCCAAC
7450981
7450982
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
ACTCTGATTCTTGCGGGCTCAAAAACTCTTTCC
7451051
7451052
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
AAATTACTTTTCTACACAGGTGCTAGACCTTCAG
7451122
7451123
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
GTGGGGTGAGTACTTCTAAAACATTCACCACATCT
7451194
7451195
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
TTTTAGCTTTAGATAATGAATCGATGGCTAAAAAG
7451266
7451267
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
GTCGCTGCAAATTTCTCTAATCCGGCAACGAATT
7451337
7451338
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
TATTTGTTAGCATCAATATATCACACCTGTAGAT
7451408
7451409
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
AAAATTTCTACCTAAAGAGCTATTTGTTGCTATCT
7451480
7451481
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
CACTTCTTGAGCAAACATTTGGCGATTCACTTTA
7451551
7451552
GTTGAAATAACCTCTAATCCCTATTAGGGATTGAAAC
GTTTCCGCTTCGACTCCCGTACAGCCTCAGCTTCC
7451623
7451624
GTTGAAATAGCCTCTAATCCCTATTAGGGATTGAAAC
7451660
Left flanking sequence : Till position 7450340 (length
bp)
ATTTTCCACCTTCTCTATTTCATTTTGATATGATAATATTAGGTCATCCGCGAAACCGAACCTTGAAAAC
TACATATTTAAAGGCTTTCAGATGCCCGCA
Right flanking sequence : From position 7451660 (length
bp)
TTATAATACAAACTTTAGATGGGATTCTAATATCATTCATTATTTACCGTGAAAAGGTTCTAGTTGAAAC
ATGTTTTACACTGTTCTTAAGACAGCCTTG
Print the CRISPR sequence : From position
bp To position
bp