Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019693_17                                                                                                                 top


Strain : Oscillatoria acuminata PCC 6304 RefSeq :NC_019693 (chromosome circular)
CRISPR id : NC_019693_17
DR consensus (25 bp) : TATGCAATACGCCCCTAGAAGAAACNumber of repetitions :2
Begin Position : 1540280 End Position : 1540368

1540280TATGCAATACGCCCCTAGAAGAAACAAGGATAAGGCCCGATTCCATTGACAAATAAAGAGAATT 1540343
1540344TATGCAATACGCCCCTACAAGAAAC1540368
Left flanking sequence : Till position 1540280 (length bp)
TGTCTTTCCCGATTTTCAATGGCAACACCAGGCGGGGGGTTTTAACCTAGCCCTGAATTGGTGTATTTGT
AGGGGCGTATTGCATACGCCCTCTCTCATG
Right flanking sequence : From position 1540368 (length bp)
TCCGGATGAGGCGGGATTCAATTTACCACCTGGACAGGGCTAGGGTTTTAACCTTGTAGATGCGCTTCGG
GAAGCGCCCTACAGATTCATGAATTGCCCC
Print the CRISPR sequence : From position bp To position bp