Institut de Génétique et Microbiologie

CRISPR details


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Université Paris Sud

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NC_019729_51                                                                                                                 top


Strain : Oscillatoria nigro-viridis PCC 7112 RefSeq :NC_019729 (chromosome circular)
CRISPR id : NC_019729_51
DR consensus (37 bp) : GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCNumber of repetitions :71
Begin Position : 6125700 End Position : 6130855

6125700TTTCAAGCCCTAGATGGGGAAATAGGTTTTTTCCGGCGCACTGGGATATCGCAGCTTTGAAACCTACTGTCA 6125771
6125772GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTGTCAGGAATCGATCAGAGTGTTGGAAGTATTGA 6125842
6125843GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTGAGTGCTCTTGCCAAAGATGTCTAAGGTTCCTT 6125913
6125914GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTCAAGCTGGTTAGTCTGGCGCAGTTTTTCCCGTGCC 6125986
6125987GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTATTAATCCTTTTAGCAGATATCTGGGCGCCTA 6126056
6126057GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCAGTCGTCGGGGTCTGGCGGTTCGTCGGTCGATTC 6126127
6126128GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCATTCTGATGCGCTTTCCCAGATGGGAGGATTGCTCCGTTT 6126204
6126205GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCATGATTGTCGATCGCAATTTGATGTTTCTGATGATTCTT 6126280
6126281GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTTAATGATAGGTGACTGCACGCGATTTAAATGA 6126350
6126351GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTTCAGCGTCAAGCGCCTTCGCCTGGTACGAATT 6126420
6126421GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCAATCGTTCCTTGGGACTTCCCCGCCCCGATGGGG 6126491
6126492GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGGCACTTACTCTTACTACTGGCGCAAGCATCTCAAAA 6126565
6126566GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCATACAGAAGGCTAAAGGGCGATGGCTGGTAGTGTTT 6126638
6126639GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCCTCAAAAGATAACTTGCAGCGGACTTTAAATCCTTA 6126711
6126712GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGAATATATGCACCGCTTCCCCCCTAGGCAGAAAGGGTTA 6126787
6126788GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTTTTTCATAAGAATGGGAGGAAGCGATCGCCCT 6126857
6126858GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTGATTGATTCGCGCTTCCTGGGCGCGAGACTTTGCAAC 6126932
6126933GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGAGATTGCGATTGTCCGTAGCGTCGCATCGCGGCCCG 6127006
6127007GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTCTTCCTCTGCTTGCACCAATGCCTTGAGAGCTTC 6127078
6127079GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTCAGGTTCACAGTGCAGTTCACGCGATTTGTTCT 6127149
6127150GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGTTGCTTATCAACCCATTCAACAACAGCCAAAGGTTC 6127223
6127224GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCACAGCGAAGGCAGCCGAGGCCCACGAACCAGAGCCCG 6127297
6127298GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTAATTTTCTTGCTAACGAACCGACCACCGATGC 6127367
6127368GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCCTAATTGTCCAAAAGTTGGATTAAGAACTGCCGC 6127438
6127439GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTTTTCGCTAAAGAAGCCTCGAAAGGCGACACGGGCGGT 6127513
6127514GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTGATGCGCGTGTAGGATGCGCGCCCCCCGTTGGATT 6127586
6127587GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGTATCTAAACCAGGTGACAAGCAAGGAGCAAATTCTTTG 6127662
6127663GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCAAAAACGAGGTGACTAAAGGGTTTAAAAAATCTA 6127733
6127734GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGCACTTATCTTGGCTGCGCGTAATAATTATAAAAGT 6127806
6127807GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGATACTTTACGGATTTTGAAAAGCGCTGCTCGATCGC 6127880
6127881GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCACCTAATTTAACGGCTTTTGTTCGGTAATTCCG 6127950
6127951GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGCGAATGAGTGAGATTTAGTCAAGAAGTGAACCC 6128021
6128022GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTTTCCTGGAGCTTGTCTGTCGGTCGCTCACCTCTTGCTCCTTCG 6128102
6128103GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCAAATAATCCCGAAACAGCATCACATTGAAAATCGA 6128174
6128175GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGCTAGGAGCGATCGCACTTCTTGCACTTTTGCCC 6128245
6128246GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTGTTGGGCCAGATTTTCTGGCTCCGAAGTTAAT 6128315
6128316GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGCAAGGCAAAATACTGGATCTGTCGGCTCAAAAACTGG 6128390
6128391GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGGGATGCCCTAAATTTTACGGGCAGTTAAGAGGAC 6128462
6128463GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTATTTACCTCAAATTTCTTGACAGTGGCAGGACT 6128533
6128534GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTCTCGAAAGCTTGGAAGATTGGTTGGAGCGAAACCCTGGTTT 6128612
6128613GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTTCGGCCAGGCGCATTCTTAAGCGCGGCAGCTACTGGGTAT 6128690
6128691GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGGGGCGGGAGATGGCTCCCGCTGGAGTGCAGCCTTTTGTGC 6128768
6128769GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGCGTACTGGGGAAGGTGACCGGGCAATTCTTACCGATT 6128843
6128844GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTGTGCGGTATCCGCACCACAAAGTCCGCCCGATCG 6128915
6128916GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTTGGGTACGATAAGCCCCAGCCCGGATTACTCTA 6128986
6128987GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGCACCGACCGAGCCGATCGCACCGACCGACGTAGCCGCAATCAA 6129067
6129068GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTTAGTCAAATGTAACCTTAATTGATAGGAATAGAAGA 6129141
6129142GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGGGGCCCGATTAGTTTCAGTGGCTCCCTAATCC 6129211
6129212GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCATTGAAAACTTTTAAATTACCTCTGTCCTCATCAA 6129283
6129284GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTTGAAAAAATTCTAGATGGGGCATTTTTCATATCTAG 6129357
6129358GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTTTGTATTTTTGGGTTAACTCATCTAAGGTTAGAATATG 6129433
6129434GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGCAGAGAAACCGTGTGGATGTCTGGCACAGCCGTCG 6129506
6129507GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTTTGCTGTTCAGTTAATTTAATATTTGTTTCAATAAA 6129580
6129581GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGGCAGCTTGCATAGCCCAATCCATCGAAAACTCAAT 6129653
6129654GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTTTTCTCCTGTGTTTAAATTACACACACCAAAAA 6129724
6129725GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTCAAAAGTTGCGTGCTCATAGATATCTCCGGGCGAG 6129797
6129798GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCAAGTGAGAAAAGTCTGAGCATCAAAGGCACTAAT 6129868
6129869GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTCTATCAATCATTTTAAAACAAGCAAATAATGTTTAA 6129942
6129943GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCATTTTATAGCCGCAACAATTGCTTGGGGGTGGCGAGTA 6130017
6130018GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGGATTTGACTCAGCACAAGGTGAATATATTGGGC 6130088
6130089GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGCACATCGTAGGCGATGTCGATAAAATAACAGCATTGC 6130163
6130164GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGTCAAAGCAGCCACTCCTTCACTGGCTACTGCTGT 6130235
6130236GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTAAGTCAGGCATCCGTATTTCGGAATCTCGATCGAAT 6130309
6130310GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCAGGAGCAATGGAACTGTTTACAGTGTTTACAACAGG 6130382
6130383GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCAAGCGCAAAAACTGTACCTCAAAGTATCTAGCGT 6130453
6130454GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCATAAAACTAGAGAGTTTCGATCGCACTCGATCGA 6130524
6130525GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCGTTTTTAGCGCTTGCTGTTTTTTGTTGTCTTCTATATCAT 6130601
6130602GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCATGAAGGTCATAGTTTCCACGAAATTGAAGAGA 6130671
6130672GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTGAGCAAACCACTGCCGAGGTTCGCCGCCTGAAGTG 6130744
6130745GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGCTGTGGTGTGTGTTTGGGTTAAATCCTAAGCGTCGGTT 6130818
6130819GTTTCAATCCCTGATAGGGTTTTAGGTTTTTTCCGGC6130855
Left flanking sequence : Till position 6125700 (length bp)
CTTGGAGGCGTGTAGTCGATCGATTGCTTGAGGTTATGGGAGGAGATAAAAAGAGAGAGGAGAGGTCTAT
TTTTGAGCCAATCATTTTGTAGGTTGGACG
Right flanking sequence : From position 6130855 (length bp)
CGCCCGTTCCAGAAGCCTTGCTGTATTTGGTTTTCAAGGTTCAGTTCTGTGAATCTAAAACAAAAGTACC
ATTCCAGCCTGGGTCTTGTCAATAGCAAAT

Print the CRISPR sequence : From position bp To position bp