Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019740_6                                                                                                                 top


Strain : Microcoleus sp. PCC 7113 RefSeq :NC_019740 (plasmid pMIC7113.03 )
CRISPR id : NC_019740_6
DR consensus (32 bp) : GTTTCAGTCCCCTTACGGGGATTAAGTTCGTGNumber of repetitions :2
Begin Position : 48978 End Position : 49085

48978GTTTCAGTCCCCTTACGGGGATTAAGTTCGTGAAAAGAGGGGTTAATGAAGATTTAGAGGAGGTAAGTGGTGGGGT 49053
49054GTTTCAGTCCCCTTGCGGGGATTAAGTTCGTG49085
Left flanking sequence : Till position 48978 (length bp)
AGCGAGACACCAAATATTGCAGCTTGGCTCCAGGCTCATCCCTATTAATTAAGCGGGAAGTATCGCTAGT
TCTGCTGTTTGTTGCTGAATACTGGTAAAA
Right flanking sequence : From position 49085 (length bp)
GAAAGTCCGCCATCTGAAACCTTGACGGACAGAGGGTTCTACAAAAGATTTTCGTGGGACTCTTTTTCAC
CCTCATTTCAGCCCCACTAATTGAAACATA
Print the CRISPR sequence : From position bp To position bp