Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019748_1                                                                                                                 top


Strain : Stanieria cyanosphaera PCC 7437 RefSeq :NC_019748 (chromosome circular)
CRISPR id : NC_019748_1
DR consensus (36 bp) : CTCTATCTTTTGTAGAGAAACTAATTGAATGGAAACNumber of repetitions :8
Begin Position : 534533 End Position : 535100

534533CTCTATCTTTTGTAGAGAAACTAATTGAATGGAAACCTTGGTGACAAAATAATTAACGTTTCTGCCCATTTCAGCCATT 534611
534612CTCTATCTTTTGTAGAGAAACTAATTGAATGGAAACCGGAGTAAAACCCCAGCTTCCCATTGCCATTCAAGTT 534684
534685CTCTATCTTTTGTAGAGAAACTAATTGAATGGAAACAACGGTTAAGTTTCCAATTACGCCAGGATCGCTATAAC 534758
534759CTCTATCTTTTGTAGAGAAACTAATTGAATGGAAACAAAGAGCCGAGAACGACATCAGGACGGGAGGGACTTAC 534832
534833CTCTATCTTTTGTAGAGAAACTAATTGAATGGAAACCAAGCAACACATTCTTGTGTTTTTTTCCAAGGGTATTCTTCGCCAA 534914
534915CTCTATCTTTTGTAGAGAAACTAATTGAATGGAAACCTAAAATTTTTCTGAGGTCTTTCGATAAGTCTGACGC 534987
534988CTCTATCTTTTGTAGAGAAACTAATTGAATGGAAACCTTTTAAAATCTCTTGGGAAAGCGATCGCCTTCTTTGGATT 535064
535065CTCTATCTTTTGTAGAGAAACTAATTGAATGGAAAC535100
Left flanking sequence : Till position 534533 (length bp)
TTTTTCTTTTGTTCTTTTTTACTGTTTCGGACTCTTTGAAAGTCTATCATTCGCAAACATACTCTGGACA
TCAGACTGTATCTGGGTTTTAATGAAGGGA
Right flanking sequence : From position 535100 (length bp)
TCGTCGTGGATTTTTTGAATATCTTCGGAGCTCGACTTTATCCAATCAAGCAGCATAAATAGCCAGATCT
CTCAAACGATTGAATAAAGAACGAGGGACT
Print the CRISPR sequence : From position bp To position bp