Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019757_19                                                                                                                 top


Strain : Cylindrospermum stagnale PCC 7417 RefSeq :NC_019757 (chromosome circular)
CRISPR id : NC_019757_19
DR consensus (37 bp) : GTTTCAGTCCCCTTGCGGGGAGTTGGTTAGCGGAAAGNumber of repetitions :10
Begin Position : 3350944 End Position : 3351637

3350944GTTTCAATCCCCTTGCGGGGAGTTGGTTAGCGGAAAGCATGACCCCTTAACCTTTGCCGAAGCCCTTAAAA 3351014
3351015GTTTCAGTCCCCTTGCGGGGAGTTGGTTAGCGGAAAGATTTGTGACGTATGTGGAGAACGGCGCCCCATACAG 3351087
3351088GTTTCAGTCCCCTTGCGGGGAGTTGGTTAGCGGAAAGTAAAGCTTATCTGTACAACAGTGATGTTTATATCAC 3351160
3351161GTTTCAGTCCCCTTGCGGGGAGTTGGTTAGCGGAAAGCCAAAGCTAAAAGGTCTGATTGAAGTGCCTACCCCGGAT 3351236
3351237GTTTCAGTCCCCTTGCGGGGAGTTGGTTAGCGGAAAGCCATAGCCAACTGGACTAACTGTAAAGTTTGGGAT 3351308
3351309GTTTCAGTCCCCTTGCGGGGAGTTGGTTAGCGGAAAGTGAGAAGTTGAAATCTCAAGCAGAGTCAATCATTAGAAG 3351384
3351385GTTTCAGTCCCCTTGCGGGGAGTTGGTTAGCGGAAAGTTAGTCAATTTGATACTAATGCCGAACTATTTTT 3351455
3351456GTTTCAGTCCCCTTGCGGGGAGTTGGTTAGCGGAAAGGATGGGGAGAAAACATCCAAAGGTAAGGATTATTAC 3351528
3351529GTTTCAGTCCCCTTGCGGGGAGTTGGTTAGCGGAAAGTTGTGGGTGGTGCGTTCTGTTTGTTTTTAGTTTTT 3351600
3351601GTTTCAGTCCCCTTGCGGGGAGTTGGTTAGCGGAAAG3351637
Left flanking sequence : Till position 3350944 (length bp)
TGTTTGCATTGAGCAATCAGCAGGAAAACCCGTTTGGTATTGGGGCCGGAGTTTGTTAGCGCAAAGGGAG
TAGGGAAGTAGGGCGATCGCTTCCATCAAA
Right flanking sequence : From position 3351637 (length bp)
TCCGCCATCTGAAAGTCAAACTGGAGAAGGATTCTAGACAGGATTTTGGCAGACCTCTATTTTTAGGTCG
ATTTCAGGCTCCGAAAAACTGCCGGCTGAA
Print the CRISPR sequence : From position bp To position bp