Institut de Génétique et Microbiologie

CRISPR details


Home About CRISPRs News FAQs Help Contact Us Examples IGM
Université Paris Sud

Navigation

Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison

Other Tools

CRISPRcompar
CRISPRtionary
CRISPRfinder

GPMS Links

GPMS Team
Tandem Repeats DB
MLVA Web Service


NC_019778_2                                                                                                                 top


Strain : Cyanobacterium stanieri PCC 7202 RefSeq :NC_019778 (chromosome circular)
CRISPR id : NC_019778_2
DR consensus (36 bp) : GTGATCAACGCCTAATGGCGATCTGAGGTTTAACAGNumber of repetitions :7
Begin Position : 3030550 End Position : 3031026

3030550GTGATCAACGCCTAATGGCGATCTGAGGTTTAACAGTCTCGGTATCGCTGGTTAATTCGGTTGTCGTTATCAC 3030622
3030623GTGATCAACGCCTAATGGCGATCTGAGGTTTAACAGGAGAGATGGTGGGCAATCAATCAAGATAAAATCGTAGT 3030696
3030697GTGATCAACGCCTAATGGCGATCTGAGGTTTAACAGGAAGATGGGGTAGTGAGTTCATCACCAAACAGTG 3030766
3030767GTGATCAACGCCTAATGGCGATCTGAGGTTTAACAGAATCTTACGAACGGCGGTGTCAGGGCTTAAATGATAGAA 3030841
3030842GTGATCAACGCCTAATGGCGATCTGAGGTTTAACAGGCTAATTCCTTCTCTTTACGTCTTCTAATTTCCAAAG 3030914
3030915GTGATCAACGCCTAATGGCGATCTGAGGTTTAACAGGTCCATTAAACCCATCCCAGTTCTCTTGGGGGGGGATAAT 3030990
3030991GTGATCAACGCCTAATGGCGATCTGAGGTTTAACAG3031026
Left flanking sequence : Till position 3030550 (length bp)
CTACATGATCAAGCTAGGTTAACCCCTAGCTTTTTGAATGCCATAATTAAATATCACATGAAACAACTGA
CATGAGCATAAATATTATTTTCGCTCTACC
Right flanking sequence : From position 3031026 (length bp)
AGCGACTTCTGAAACCTTTACACAGCAATAGTTGATATTTAACTTTTCAAGGTACTTCAGAATTTTCAGT
ACTCTTACTAAGATTAACAAACTTTTGGCA
Print the CRISPR sequence : From position bp To position bp