CRISPR details
Home
About CRISPRs
News
FAQs
Help
Contact Us
Examples
IGM
Navigation
Home page
CRISPRs database
Browse CRISPRs
BLAST CRISPRs
FlankAlign
CRISPRs utilities
My CRISPRs DB
CRISPRs finder
CRISPRs comparison
Other Tools
CRISPRcompar
CRISPRtionary
CRISPRfinder
GPMS Links
GPMS Team
Tandem Repeats DB
MLVA Web Service
CRISPRs details
NC_019779_1
Flanking alignement tool
Page manual
  
Home Page
NC_019779_1                                                                                                                 
top
Strain :
Halothece sp. PCC 7418
RefSeq :
NC_019779 (chromosome circular)
CRISPR id :
NC_019779_1
DR consensus (37 bp) :
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
Number of repetitions :
40
Begin Position :
751854
End Position :
754744
751854
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
CATTTAGCATCATAAGCCTGCTTGGTCAGATGATA
751925
751926
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
GAAGGAAATCCTGACCACACCGATCGCGATATCTCT
751998
751999
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
AAGTGAAGAATTTAACTCACTTAAGGAGTCAAT
752068
752069
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TTCTACCAGTTGTGGCTCTTTTTCTTTATAAGC
752138
752139
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TTCTTATCAAAAATAGAAATACTCTCGCAGTGTATCCAA
752214
752215
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TAAACGGATACACATACACAGTGGACATCGAGTTCATC
752289
752290
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TGGTGAGGGTTTATGATCATCCTTATGCCAAGAAAA
752362
752363
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
ACTGTTATGGGTGAATCTCGCCGAAAACCAAGACGGA
752436
752437
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
CAATCGTCAAAACAGTGATGGCAGTAATTCGGAA
752507
752508
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TGGCTATTAATCTCTCTGTAGAACAACGTCAAACGATTCAAGTATTA
752591
752592
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
GATTTTATCCTTTTTTTTGCTATAGTTCCGCTTTTTC
752665
752666
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
CTAGCGGTAGCTGCTACCACCTCATCTGCTACCAGT
752738
752739
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
CTTTTCCGTGCGGTTACTCAGGTTGTCAGCAAAG
752809
752810
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TCGGCGGTATGGAGGGTGTAAGAATTTGAGATGCAGCCAGCAAAG
752891
752892
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TCGAGAGTACCGAGAAGGAATATTTCAGTAAGAGAGAGAG
752968
752969
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
CTGAGAAGCAATAATCCTGCCACCATATCAGACAA
753040
753041
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
ATTAATCCGATGGAGTAACTGCCATCTGGATATTCG
753113
753114
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
AATACCTACCAGTTACTACCAACTGGTATCATATTAG
753187
753188
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TGGACACAACTACCAAAACTCCCCCAAGTCAAC
753257
753258
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
ATCAGGCTTAGGGGGCAAAGTGGCTCTAAGGAATA
753329
753330
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TTTTCTTTTAGGCTTTTCTTTAATCCGATTCAA
753399
753400
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
CCCCAACTGGAAACTAACGGAGGCACATTTGATCCGATTCAA
753478
753479
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
ATGGCAATGAGGTAGCAGGTGGTAGCTATGAGGAT
753550
753551
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
CCCTTCCGTCCCCCCAAAGGGGGGAAACGGATTTTCC
753624
753625
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TTCCCTCACAGTATGCTTCTACCAGTTGCTGAAG
753695
753696
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TCCAGAAAATTTGATATGAGACGAATAGCTCTTAC
753767
753768
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TAGCCAAATCTCCCTCGGGGATTCAAATCCATTGGA
753840
753841
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
CATCAATAAGATTAGTTATAAAGTTATTGAATCCAAC
753914
753915
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TGATGTTTTCTATGATAAAGATTACGTCATTAAT
753985
753986
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
ATCTGTGTCTTTGTTCTTTACGCATTGTTAATTC
754056
754057
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
ATGGCAAGTAAAAGTTATTGGGAAAGGAAGTAAAG
754128
754129
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
CTTTGATATCCTCGGGGATATCTTCTTCTTTAGATGGG
754203
754204
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TGATATGGCTAGAATCCTTTCCACATCTAGCTAAAATTTT
754280
754281
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
GTAATTTTTCGGCTAGCTGCACAGCTTCTGATT
754350
754351
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
ACAGCAAAAGAAGCACCGCCCAAAGTAGTAGCCCCAGC
754425
754426
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
AATTAAAACAAACTAAGCAAGGGCGTTTAATTCA
754496
754497
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
CGTAAAAGGGCAAGCTAAGCCTGATAAAAATGA
754566
754567
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
AAATCTTATTAAAAAAGGCATCTGCATACTCAT
754636
754637
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
TAACGGAAACACAGTCCTTTTGTGGCGTGCTTTC
754707
754708
GTTTCAATCCCTAGGAAGGGATTAGGTTTATTGAAAC
754744
Left flanking sequence : Till position 751854 (length
bp)
GAGATTTAATGTAGTCTCTTAAAATTTCTGCCATAGATAAATTTTTTCTTGTGGCAACTCTTTTTAGAAT
ATCATATTGTGGAAAACCGACAAGCACGGT
Right flanking sequence : From position 754744 (length
bp)
CGCAGGCCTTGAGAACCCTTGTCATATTGAGTTTTCAAAGTCCAGTTGCGCGAATCTAAGATAATCATAG
CAAATGCGATCAGAAAAAACAACCCCAAAT
Print the CRISPR sequence : From position
bp To position
bp