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CRISPRs details
NC_019902_6
Flanking alignement tool
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NC_019902_6                                                                                                                 
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Strain :
Thioalkalivibrio nitratireducens DSM 14787
RefSeq :
NC_019902 (chromosome circular)
CRISPR id :
NC_019902_6
DR consensus (37 bp) :
GTCAGAACGACTTCCCTGATGAAGAAGGGATTAAGAC
Number of repetitions :
16
Begin Position :
1469966
End Position :
1471052
1469966
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACT
TGCCCTGACGGACGCTGTTGAGGTTCTGCAG
1470033
1470034
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACG
GCGTTCGGCATCCACGCCGTGACCAGGACATCG
1470103
1470104
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACA
ATGGACTTGGTCTCTCCTGTACTGAGCGTGGTGT
1470174
1470175
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACC
CGCCGGTCACCGCTTCGTCCACGCGGTCGGCCT
1470244
1470245
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACC
CATCGGCCGGGAACACGGTGGCCCGCAAGGTTTG
1470315
1470316
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACA
AGCTCACCGTGGCAAAGGCATCGAAATGCCGGA
1470385
1470386
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACG
GGCCAGTCGGCACCGACTTCCTCGGCCAGGGCG
1470455
1470456
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACG
GTAACTGCGGTCATACCCTGTACTTGCCGTGC
1470524
1470525
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACC
CGGTCCATGAACTCGTCGTATCCAAGCGCTGA
1470593
1470594
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACA
AAGCGGACGCCTCACACTGACCACGCCTACCCT
1470663
1470664
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACC
CAAACAACCCTGGCGGGATTACATCAAGAAAA
1470732
1470733
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACT
TGGGGAACTCATGCGGCTTATCGCCGCCTTGG
1470801
1470802
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACA
AGGTCTGCGAAGGTGTTCGTGTACCTTGCGCATG
1470872
1470873
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACG
GGTACTGAGCGCTCGGTGCTTGCTTCTTCTTCGTG
1470944
1470945
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACT
TTCGCAATTTCTGAGGATCATTCGTGTTCTTCGT
1471015
1471016
TCAGAACGACTTCCCTGATGAAGAAGGGATTAAGACT
1471052
Left flanking sequence : Till position 1469966 (length
bp)
CGTCAAGTCATCGCAGCTTTCTCCAGGGGGGGCTGAACGGATACGATGAAGAAGGGATTAAGACCTTCAT
CAGAATGGCGCCTCGTCGTCATCGGTGGGG
Right flanking sequence : From position 1471052 (length
bp)
CTTGACCTTCGTCCGGAGTGTGTCGTTTTGACTTCAGCCAGAGGCGTAGGGCGGAAAAGGCCGAAGGCCG
TCATCCGCCAGCCGGCGCTGGGGCGTCCCC
Print the CRISPR sequence : From position
bp To position
bp