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CRISPRs details
NC_019943_5
Flanking alignement tool
Page manual
  
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NC_019943_5                                                                                                                 
top
Strain :
Methanoregula formicicum SMSP
RefSeq :
NC_019943 (chromosome circular)
CRISPR id :
NC_019943_5
DR consensus (32 bp) :
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
Number of repetitions :
73
Begin Position :
2643718
End Position :
2648491
2643718
ATTTCAATCCACACTCCCGCAGGGGGAGTGCC
ACATTTTAGGGAATTGTTGCAGGCGTTGATCAAC
2643783
2643784
ATTTCAATCCACACCCCTGCTAAGGGAGTGAC
CACGCGATCAGGTAATTCATAATCGGCCCGATAAT
2643850
2643851
ATTTCAATCCACACTCCCGCGAAGGGAGTGAC
TTATGGCGGTCGTTCATGTGACGAGTGCCGAAG
2643915
2643916
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TATTTTTTCAAATCTGTTGCGTGTAGATCCGGGG
2643981
2643982
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TCGATTCTCGGGGCATGGTCAGGGAAGTGGGGA
2644046
2644047
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTCACCGATCCGCCATACGTCAAGGAGCTCTAT
2644111
2644112
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
CACCGTCCTTCTCTCCCATCACGACAAGCGCCTG
2644177
2644178
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TCCGGAATACAGCACAGTGCCCCCGGTACTATCC
2644243
2644244
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TAGGAGATGACCCTAGAATATGGGCTTTTGAT
2644307
2644308
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTCAGGAGTCGTTCCCGTACCGGCAGGTTTGTTCA
2644374
2644375
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TGTCGAGCCACGACCGGACCAACAGGTAACCCGT
2644440
2644441
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTGCATCGCCCTTTGTTTCAATGGCGATGGAAT
2644505
2644506
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GCTATTCGTGAACCACCTTTTATTGATGGACCA
2644570
2644571
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TGCCCCGCTCGTCAATGACCATCCCGTTGGAAA
2644635
2644636
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TCCTGGTTTGACCGCAGTTTATCGTATTCTGGAA
2644701
2644702
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TGCAAATGGCAGAGTATACCGAAAGATCGATGCA
2644767
2644768
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTCTTTCAAGCAGGGGATTTTATGGAGCTCTGT
2644832
2644833
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TCAGCATGTCGGGGAGTTCCAGTTCAACCTCATA
2644898
2644899
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
CTTTCGCTTCCGTGGATCTCAACTTCCCGAGGCAT
2644965
2644966
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GAAAAAATGTGTATGTGCATAATGGGTACTCTGT
2645031
2645032
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
CGCCTTTGTGTACATCGCGAACCCGAAAGAATCATG
2645099
2645100
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TATTTTTTAACCTTCACCGTTACGCGATCGCGGA
2645165
2645166
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
ATTTTCAGGAGATGAAAGTACATGGTTAACGTAAA
2645232
2645233
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
AGATATAGATAATAAATCTGCACAATGAATTAAA
2645298
2645299
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TCATCAATCATAATATCACCCAAACATATTACA
2645363
2645364
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
CCTTCGACGGGATGCAGTCCGGTGTCGTGTAT
2645427
2645428
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GGATCAACCTTTCCCCCGCAAAGCCTGCAGCGG
2645492
2645493
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTTTGATCACAGAGATATTTTTTAGACATCTGGA
2645558
2645559
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTCGTATGGTGGGGATGGCTTGTCATGCCGATA
2645623
2645624
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
CCCCATCGCAGTTTTCATCCCGGTCGCAAACTCT
2645689
2645690
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TCAGATGGACCGCCCCCTCCAATTGACGTAATA
2645754
2645755
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GCATTACCCGCCCCGGAGAGGTTCGAGCTCGAT
2645819
2645820
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
AGGTCCGGCCCCATCGTCCGGGCCGCATTCGTCCG
2645886
2645887
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GTTTCAGATCCCAGATCCGTTCATAGACTTTCG
2645951
2645952
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GGATTGCTGCGAAGGGTGCCTTGAAAGAGTGCAG
2646017
2646018
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GCCGTACGTGCCCGCCATGTACATCAGGAGCTT
2646082
2646083
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TATGCGTCCCTGATCTTTTTCTTGTATCCTCCCT
2646148
2646149
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
CGCTTTCCTCGGTGGAATGCGGAAAAGGATGTGT
2646214
2646215
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TCCACATATTGTCTGGTGTACTCATGGGAGATT
2646279
2646280
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
CCATTTTGCACACCTGTCTTTTGTTCGTCGATCA
2646345
2646346
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTTGCCAGCACCCGGGCCACGTCTGCATCTCGCA
2646411
2646412
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTGGCATTACTCCCGATTCAAATAACATTATCAA
2646477
2646478
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
CTGCAATGTTTCAAAGGTTGTTAGCCTTATGCA
2646542
2646543
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
ATTGCGCTTTGCATCTCCCTGTATGCTACACTTT
2646608
2646609
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTAACGGTTTAGTAGATGCAACGCTATCTGTA
2646672
2646673
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
CTTTTTACTGGTTGTCATGACAATCTTTGTAATCAG
2646740
2646741
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTAAATATGTTGTACTAGAATCAATCTCTATA
2646804
2646805
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
CAGTGTTTCAAAGCTCTGGATCGTGCCGTGGAAGA
2646871
2646872
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
CTGCAATGTTTCAAAGGTTGTTAGCCTTACGCA
2646936
2646937
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GTTACCATTCTTTTTCATCTCCTGCTCTAATATAA
2647003
2647004
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTGCGATCATGCAGATTAACGCCTGCGCTGCAAT
2647069
2647070
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TGAAGTGGTGGATGGATTCCACCGGACCCGCGTTG
2647136
2647137
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
ATGGTGACGGCATTTATTGCACCATTCACGGT
2647200
2647201
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTCCGGGGAATCGCGGATGCCTTTGCGGATCAATGGGG
2647270
2647271
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TAATACAAAACCACTTCATTATCTGTCTAAAATT
2647336
2647337
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TCGGTGGTCTGTTGACCGGATCAAGGATGGTAAGCG
2647404
2647405
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GTCTCTTTTGTTGACCGTATATCTACCACAAAA
2647469
2647470
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
CGGGACCACCAGCGTTGCATCGCGCCGGTAATCAAA
2647537
2647538
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GCTCCGAGATCGCGTTGCTGATCGTGGAGATGCT
2647603
2647604
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GAAAAGGAGGGAGAGGAGGAAGCGGCAGAAACAGAGT
2647672
2647673
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TCACTCCTGCACAGCAGGCGTTGGTTATCGAACT
2647738
2647739
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTAGATGGGCAATTGTATTCACCCGTTCCGGAT
2647803
2647804
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GCGTTCCTGAAGACGGGGCCGCATGTCCTGACGG
2647869
2647870
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GGGGATCCTTGAGCGACTCGCTCCGACCTTGATA
2647935
2647936
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TCCCTTGATAGGGTGCGAGTGGACCGGGTTGTAT
2648001
2648002
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TACTATTGCAAGTATCCGTTTTACATCCATGA
2648065
2648066
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTGATGAGCTCGGGATGTGATCTGGATGTTCATCG
2648132
2648133
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
GTAAAGTTTACTGTTTACGCGCAATCCCATTAAG
2648198
2648199
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TATTACGCTGAATACAGGGATTGGAGGGCAAAG
2648263
2648264
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTAGGTTCTAAATTTGTTGCTGTATAATTTCCA
2648328
2648329
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTTATCTATCGGTTAAATGGTGTGCAACATGGT
2648393
2648394
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
TTTTACGTTTCCCTGGTTTTTAACCCTTAAATTT
2648459
2648460
ATTTCAACCCACACTCCCGCGAAGGGAGTGAC
2648491
Left flanking sequence : Till position 2643718 (length
bp)
ATGACAGTATAGGAACTCCCGGTTTGAGGATCTGGCTGGGATCGGGAGAGTGAGGGTGCAGGGCACTGGT
GGATCCCATTTCCCTGAATCAGTATGTCCA
Right flanking sequence : From position 2648491 (length
bp)
TGTAAAATACTCGTTAAGTGTTCATGAAGAAATACCTGATGTATGTGCAGTAAATGAGAAATCCCCGAAT
AATAACAATTGGATTTTCCTTTACGTATTT
Print the CRISPR sequence : From position
bp To position
bp